Bump lots of modules so that conda versions have arm builds #46
GitHub Actions / JUnit Test Report
failed
Oct 21, 2024 in 0s
2 tests run, 1 passed, 0 skipped, 1 failed.
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Check failure on line 1 in Test Workflow QUANTIFY_RSEM
github-actions / JUnit Test Report
Test Workflow QUANTIFY_RSEM.homo_sapiens - stub
Assertion failed:
1 of 2 assertions failed
Raw output
Nextflow stdout:
N E X T F L O W ~ version 24.04.2
Launching `/home/runner/work/rnaseq/rnaseq/.nf-test-563a7a6c3f06f7d05e766c57cc23dd52.nf` [loquacious_sammet] DSL2 - revision: b8226b214a
[f2/59951d] Submitted process > RSEM_PREPAREREFERENCE (rsem/genome.fasta)
[0c/6a45f8] Submitted process > QUANTIFY_RSEM:RSEM_CALCULATEEXPRESSION (test)
[67/28070c] Submitted process > QUANTIFY_RSEM:RSEM_MERGE_COUNTS
[25/cd2300] Submitted process > QUANTIFY_RSEM:BAM_SORT_STATS_SAMTOOLS:SAMTOOLS_SORT (test)
[e4/c39735] Submitted process > QUANTIFY_RSEM:BAM_SORT_STATS_SAMTOOLS:SAMTOOLS_INDEX (test)
[b1/d1cab4] Submitted process > QUANTIFY_RSEM:BAM_SORT_STATS_SAMTOOLS:BAM_STATS_SAMTOOLS:SAMTOOLS_FLAGSTAT (test)
[9b/d70354] Submitted process > QUANTIFY_RSEM:BAM_SORT_STATS_SAMTOOLS:BAM_STATS_SAMTOOLS:SAMTOOLS_IDXSTATS (test)
[51/743832] Submitted process > QUANTIFY_RSEM:BAM_SORT_STATS_SAMTOOLS:BAM_STATS_SAMTOOLS:SAMTOOLS_STATS (test)
Nextflow stderr:
Nextflow 24.04.4 is available - Please consider updating your version to it
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