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Bump STAR modules #193

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Bump STAR modules

Bump STAR modules #193

Triggered via pull request December 18, 2024 18:22
@pinin4fjordspinin4fjords
synchronize #1473
Status Success
Total duration 38s
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template_version_comment.yml

on: pull_request_target
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30 errors and 1 warning
Test Subworkflow ALIGN_STAR.star - no igenomes: Test Subworkflow ALIGN_STAR#L1
Assertion failed: 1 of 2 assertions failed
Test Subworkflow ALIGN_STAR.star - no igenomes - stub: Test Subworkflow ALIGN_STAR#L1
Assertion failed: 1 of 2 assertions failed
Test Subworkflow ALIGN_STAR.star - no igenomes: Test Subworkflow ALIGN_STAR#L1
Assertion failed: 1 of 2 assertions failed
Test Subworkflow ALIGN_STAR.star - no igenomes - stub: Test Subworkflow ALIGN_STAR#L1
Assertion failed: 1 of 2 assertions failed
Test pipeline by skipping QC options.Params: --skip_qc: Test pipeline by skipping QC options#L1
Assertion failed: 1 of 2 assertions failed
Test pipeline by skipping QC options.Params: --skip_qc - stub: Test pipeline by skipping QC options#L1
Assertion failed: 1 of 2 assertions failed
Test pipeline by skipping QC options.Params: --skip_qc: Test pipeline by skipping QC options#L1
Assertion failed: 1 of 2 assertions failed
Test pipeline by skipping QC options.Params: --skip_qc - stub: Test pipeline by skipping QC options#L1
Assertion failed: 1 of 2 assertions failed
Test pipeline with default settings.Params: default: Test pipeline with default settings#L1
Assertion failed: 1 of 2 assertions failed
Test pipeline with default settings.Params: default - stub: Test pipeline with default settings#L1
Assertion failed: 1 of 2 assertions failed
Test pipeline by skipping trimming options.Params: --skip_trimming: Test pipeline by skipping trimming options#L1
Assertion failed: 1 of 2 assertions failed
Test pipeline without a group type for featureCounts.Params: --featurecounts_group_type false: Test pipeline without a group type for featureCounts#L1
Assertion failed: 1 of 2 assertions failed
Test pipeline without a group type for featureCounts.Params: --featurecounts_group_type false - stub: Test pipeline without a group type for featureCounts#L1
Assertion failed: 1 of 2 assertions failed
Test pipeline with a minimum mapped read threshold of 90.Params: --min_mapped_reads 90: Test pipeline with a minimum mapped read threshold of 90#L1
Assertion failed: 1 of 2 assertions failed
Test pipeline with a minimum mapped read threshold of 90.Params: --min_mapped_reads 90 - stub: Test pipeline with a minimum mapped read threshold of 90#L1
Assertion failed: 1 of 2 assertions failed
Test pipeline by skipping trimming options.Params: --skip_trimming: Test pipeline by skipping trimming options#L1
Assertion failed: 1 of 2 assertions failed
Test pipeline with a minimum mapped read threshold of 90.Params: --min_mapped_reads 90: Test pipeline with a minimum mapped read threshold of 90#L1
Assertion failed: 1 of 2 assertions failed
Test pipeline with a minimum mapped read threshold of 90.Params: --min_mapped_reads 90 - stub: Test pipeline with a minimum mapped read threshold of 90#L1
Assertion failed: 1 of 2 assertions failed
Test pipeline with default settings.Params: default: Test pipeline with default settings#L1
Assertion failed: 1 of 2 assertions failed
Test pipeline with default settings.Params: default - stub: Test pipeline with default settings#L1
Assertion failed: 1 of 2 assertions failed
Test pipeline without a group type for featureCounts.Params: --featurecounts_group_type false: Test pipeline without a group type for featureCounts#L1
Assertion failed: 1 of 2 assertions failed
Test pipeline without a group type for featureCounts.Params: --featurecounts_group_type false - stub: Test pipeline without a group type for featureCounts#L1
Assertion failed: 1 of 2 assertions failed
Test pipeline with dummy UMI settings.--umi_dedup_tool 'umitools': Test pipeline with dummy UMI settings#L1
Assertion failed: 1 of 2 assertions failed
Test pipeline with dummy UMI settings.--umi_dedup_tool 'umitools - stub: Test pipeline with dummy UMI settings#L1
Assertion failed: 1 of 2 assertions failed
Test pipeline with dummy UMI settings.--umi_dedup_tool 'umitools': Test pipeline with dummy UMI settings#L1
Assertion failed: 1 of 2 assertions failed
Test pipeline with dummy UMI settings.--umi_dedup_tool 'umitools - stub: Test pipeline with dummy UMI settings#L1
Assertion failed: 1 of 2 assertions failed
Test pipeline with ribosomal RNA removal.Params: --remove_ribo_rna: Test pipeline with ribosomal RNA removal#L1
Assertion failed: 1 of 2 assertions failed
Test pipeline with ribosomal RNA removal.Params: --remove_ribo_rna - stub: Test pipeline with ribosomal RNA removal#L1
Assertion failed: 1 of 2 assertions failed
Test pipeline with ribosomal RNA removal.Params: --remove_ribo_rna: Test pipeline with ribosomal RNA removal#L1
Assertion failed: 1 of 2 assertions failed
Test pipeline with ribosomal RNA removal.Params: --remove_ribo_rna - stub: Test pipeline with ribosomal RNA removal#L1
Assertion failed: 1 of 2 assertions failed
template_version
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636