Hourly export update

bugsigdb_signatures_mixed_ncbi.gmt

@@ -1,4 +1,4 @@
-# BugSigDB 2025-01-24_21:58_UTC, License: Creative Commons Attribution 4.0 International, URL: https://bugsigdb.org
+# BugSigDB 2025-01-25_09:58_UTC, License: Creative Commons Attribution 4.0 International, URL: https://bugsigdb.org
 bsdb:1/1/1_Colorectal-adenoma:conventional-adenoma-cases_vs_controls_UP	NA	91061	1236	1654	1716	1301	162289	189330	33024	40544	2037	2049	506	186826	1300	31977	91347	1653	57037	1386	186817
 bsdb:1/1/2_Colorectal-adenoma:conventional-adenoma-cases_vs_controls_DOWN	NA	100883	1117
 bsdb:1/2/1_Hyperplastic-Polyp:hyperplastic-polyp-cases_vs_controls_UP	NA	207244	57037
@@ -6321,7 +6321,8 @@ bsdb:1229/5/1_Endometrial-cancer:Serous_vs_Benign_UP	NA	861
 bsdb:1229/5/2_Endometrial-cancer:Serous_vs_Benign_DOWN	NA	2130	28112	28037	1343	1280	1282	28129	28136	419005	242750	59823	33031	2052	2051	157688	1632	147802	1596	1613	143361	178214	1351	39486	76517	216816	1685	72409	33036	1376	131111	33007	55565	66228	59505
 bsdb:1229/6/1_Endometrial-cancer:Endometroid_vs_Benign_UP	NA	1596
 bsdb:1229/7/1_Endometrial-cancer:Serous_vs_Endometroid_DOWN	NA	66228	55565	131111	1376	33029	33032	33034	33036	1685	216816	76517	43765	169292	39791	38289	38303	43770	39486	1352	1351	178214	143361	88132	1260	1613	1596	1587	1632	147802	157692	157688	1969407	2051	2052	507750	54005	33031	322095	242750	28136	28129	59823	33012	1280	1334	1335	361101	28112	162	2130	134821	103892
-bsdb:1230/1/1_Melanoma:complete-responders-(CR)_vs_non-complete-responders-(nCR)_UP	NA	2721132	186801	291645	1694	78448
+bsdb:1230/1/1_Melanoma:complete-responders-(CR)_vs_non-complete-responders-(nCR)_UP	NA	291645	1694	78448	2721132	186801
+bsdb:1230/2/1_Melanoma:complete-responders-(CR)_vs_non-complete-responders-(nCR)_UP	NA	2721132
 bsdb:1231/1/1_Ovarian-cancer:Ovarian-cancer_vs_Benign_UP	NA	38304	178214	592978	33039	1716	66831
 bsdb:1231/2/1_Ovarian-cancer:Ovarian-cancer_vs_Benign_DOWN	NA	201174	415217
 bsdb:1231/3/1_Ovarian-cancer:Ovarian-cancer_vs_Benign_UP	NA	408	407

bugsigdb_signatures_mixed_taxname.gmt

@@ -1,4 +1,4 @@
-# BugSigDB 2025-01-24_21:58_UTC, License: Creative Commons Attribution 4.0 International, URL: https://bugsigdb.org
+# BugSigDB 2025-01-25_09:58_UTC, License: Creative Commons Attribution 4.0 International, URL: https://bugsigdb.org
 bsdb:1/1/1_Colorectal-adenoma:conventional-adenoma-cases_vs_controls_UP	NA	Bacilli	Gammaproteobacteria	Actinomyces	Corynebacterium	Streptococcus	Peptoniphilus	Dorea	Phascolarctobacterium	Sutterella	Actinomycetales	Actinomycetaceae	Alcaligenaceae	Lactobacillales	Streptococcaceae	Veillonellaceae	Enterobacterales	Corynebacteriaceae	Lacticaseibacillus zeae	Bacillus	Bacillaceae
 bsdb:1/1/2_Colorectal-adenoma:conventional-adenoma-cases_vs_controls_DOWN	NA	Coprobacillus	Cyanobacteriota
 bsdb:1/2/1_Hyperplastic-Polyp:hyperplastic-polyp-cases_vs_controls_UP	NA	Anaerostipes	Lacticaseibacillus zeae
@@ -6321,7 +6321,8 @@ bsdb:1229/5/1_Endometrial-cancer:Serous_vs_Benign_UP	NA	Fusobacterium ulcerans
 bsdb:1229/5/2_Endometrial-cancer:Serous_vs_Benign_DOWN	NA	Ureaplasma urealyticum	Tannerella forsythia	Streptococcus mitis	Streptococcus vestibularis	Staphylococcus aureus	Staphylococcus epidermidis	Prevotella denticola	Segatella oulorum	Prevotella amnii	Hallella bergensis	Prevotella sp.	Peptoniphilus lacrimalis	Mobiluncus mulieris	Mobiluncus curtisii	Leptotrichia hofstadii	Limosilactobacillus oris	Lactobacillus iners	Lactobacillus gasseri	Limosilactobacillus fermentum	Filifactor alocis	Facklamia hominis	Enterococcus faecalis	Dorea formicigenerans	Campylobacter hominis	Bifidobacterium longum	Bifidobacterium breve	Arcanobacterium sp.	Anaerococcus tetradius	Aerococcus urinae	Schaalia turicensis	Winkia neuii	Actinomyces graevenitzii	Gleimia europaea	Actinotignum schaalii
 bsdb:1229/6/1_Endometrial-cancer:Endometroid_vs_Benign_UP	NA	Lactobacillus gasseri
 bsdb:1229/7/1_Endometrial-cancer:Serous_vs_Endometroid_DOWN	NA	Gleimia europaea	Actinomyces graevenitzii	Schaalia turicensis	Aerococcus urinae	Anaerococcus hydrogenalis	Anaerococcus lactolyticus	Anaerococcus prevotii	Anaerococcus tetradius	Bifidobacterium breve	Bifidobacterium longum	Campylobacter hominis	Corynebacterium amycolatum	Corynebacterium aurimucosum	Corynebacterium glucuronolyticum	Corynebacterium jeikeium	Corynebacterium pseudogenitalium	Corynebacterium striatum	Dorea formicigenerans	Enterococcus faecium	Enterococcus faecalis	Facklamia hominis	Filifactor alocis	Eremococcus coleocola	Finegoldia magna	Limosilactobacillus fermentum	Lactobacillus gasseri	Lactobacillus helveticus	Limosilactobacillus oris	Lactobacillus iners	Pseudoleptotrichia goodfellowii	Leptotrichia hofstadii	Oribacterium sp.	Mobiluncus curtisii	Mobiluncus mulieris	Peptoniphilus duerdenii	Peptoniphilus harei	Peptoniphilus lacrimalis	Porphyromonas somerae	Hallella bergensis	Segatella oulorum	Prevotella denticola	Prevotella sp.	Propionimicrobium lymphophilum	Staphylococcus aureus	Streptococcus dysgalactiae	Streptococcus equinus	Streptococcus pseudoporcinus	Tannerella forsythia	Treponema phagedenis	Ureaplasma urealyticum	Ureaplasma parvum	Veillonella ratti
-bsdb:1230/1/1_Melanoma:complete-responders-(CR)_vs_non-complete-responders-(nCR)_UP	NA	Candidatus Metalachnospira gallinarum	Clostridia	Bacteroides nordii	Bifidobacterium pseudolongum	Bifidobacterium pullorum
+bsdb:1230/1/1_Melanoma:complete-responders-(CR)_vs_non-complete-responders-(nCR)_UP	NA	Bacteroides nordii	Bifidobacterium pseudolongum	Bifidobacterium pullorum	Candidatus Metalachnospira gallinarum	Clostridia
+bsdb:1230/2/1_Melanoma:complete-responders-(CR)_vs_non-complete-responders-(nCR)_UP	NA	Candidatus Metalachnospira gallinarum
 bsdb:1231/1/1_Ovarian-cancer:Ovarian-cancer_vs_Benign_UP	NA	Corynebacterium tuberculostearicum	Facklamia hominis	Mediterraneibacter faecis	[Ruminococcus] torques	Corynebacterium	Facklamia
 bsdb:1231/2/1_Ovarian-cancer:Ovarian-cancer_vs_Benign_DOWN	NA	Actinomycetota	Microbacterium lacus
 bsdb:1231/3/1_Ovarian-cancer:Ovarian-cancer_vs_Benign_UP	NA	Methylorubrum extorquens	Methylobacterium