Check list params values #22
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| # This workflow will install Python dependencies, run tests and lint with a variety of Python versions | |
| # For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions | |
| name: Python package | |
| on: | |
| push: | |
| branches: | |
| - master | |
| tags: | |
| - "*" | |
| pull_request: | |
| schedule: | |
| - cron: '30 2 * * 1' # Every Monday @ 2h30am UTC | |
| env: | |
| POETRY_VERSION: 2.0.1 | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| python-version: ["3.9", "3.10", "3.11", "3.12"] | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Cache Installations | |
| id: cache-installs | |
| uses: actions/cache@v3 | |
| with: | |
| path: ~/.local | |
| key: install-${{ env.INSTALL_CACHE_HASH }}-2 | |
| - name: Install Poetry | |
| uses: abatilo/actions-poetry@v3 | |
| with: | |
| poetry-version: ${{ env.POETRY_VERSION }} | |
| - name: Test poetry | |
| run: poetry --version | |
| - name: Checkout source | |
| uses: actions/checkout@v2 | |
| with: | |
| fetch-depth: 1 | |
| - name: Install breizorro | |
| run: poetry install | |
| - name: Install breizorro with all modules | |
| run: poetry install --extras "all" | |
| - name: Install breizorro with tests | |
| run: poetry install --with tests --no-interaction | |
| - name: Lint with flake8 | |
| run: | | |
| # stop the build if there are Python syntax errors or undefined names | |
| poetry run flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics | |
| # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide | |
| poetry run flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics | |
| - name: Test command | |
| run: | | |
| poetry run breizorro --help | |
| - name: Download test dataset | |
| run: | | |
| curl -L -o mypipelinerun_circinus_p3_3-MFS-image.tar "https://www.dropbox.com/scl/fi/xoaqth4jhjnx098xbegvn/mypipelinerun_circinus_p3_3-MFS-image.tar?rlkey=vdgkz2xpjgpp7v7hjxm7kg6g2&st=isg70eve&dl=1" && tar -xvf mypipelinerun_circinus_p3_3-MFS-image.tar | |
| - name: Run end-to-end test | |
| run: | | |
| poetry run breizorro -r mypipelinerun_circinus_p3_3-MFS-image.fits --outfile test.mask.fits --outregion test.mask.rgn | |
| poetry run breizorro -r mypipelinerun_circinus_p3_3-MFS-image.fits -t 10 --merge test.mask.fits,test.mask.rgn --remove-islands 19,21,14h16m20.3:-65d42m07 --number-islands |