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Implemented MSISENSORPRO tumor-only analysis #253

Implemented MSISENSORPRO tumor-only analysis

Implemented MSISENSORPRO tumor-only analysis #253

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msisensorpro docker NF 24.04.2

succeeded Jan 16, 2025 in 5m 49s
Set up job
4s
Pre Run pytest-workflow
0s
Check out pipeline code
1s
Hash Github Workspace
0s
Set up Python
0s
Install Python dependencies
3s
Run actions/setup-java@8df1039502a15bceb9433410b1a100fbe190c53b
0s
Install Nextflow 24.04.2
10s
Setup apptainer
0s
Set up Singularity
0s
Set up miniconda
0s
Conda setup
0s
Cache test data
0s
Check out test data
14s
Replace remote paths in samplesheets
0s
Set up nextflow secrets
0s
Conda clean
0s
Disk space cleanup
2m 14s
Run pytest-workflow
2m 46s
Output log on failure
0s
Upload logs on failure
0s
Post Check out test data
0s
Post Cache test data
11s
Post Install Nextflow 24.04.2
0s
Post Run actions/setup-java@8df1039502a15bceb9433410b1a100fbe190c53b
0s
Post Set up Python
2s
Post Check out pipeline code
0s
Post Run pytest-workflow
0s
Complete job
0s