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Implemented MSISENSORPRO tumor-only analysis #253

Implemented MSISENSORPRO tumor-only analysis

Implemented MSISENSORPRO tumor-only analysis #253

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freebayes docker NF latest-everything

succeeded Jan 16, 2025 in 17m 4s
Set up job
3s
Pre Run pytest-workflow
1s
Check out pipeline code
1s
Hash Github Workspace
0s
Set up Python
1s
Install Python dependencies
4s
Run actions/setup-java@8df1039502a15bceb9433410b1a100fbe190c53b
0s
Install Nextflow latest-everything
7s
Setup apptainer
0s
Set up Singularity
0s
Set up miniconda
0s
Conda setup
0s
Cache test data
0s
Check out test data
12s
Replace remote paths in samplesheets
0s
Set up nextflow secrets
0s
Conda clean
0s
Disk space cleanup
2m 8s
Run pytest-workflow
14m 24s
Output log on failure
0s
Upload logs on failure
0s
Post Check out test data
0s
Post Cache test data
1s
Post Install Nextflow latest-everything
0s
Post Run actions/setup-java@8df1039502a15bceb9433410b1a100fbe190c53b
0s
Post Set up Python
0s
Post Check out pipeline code
0s
Post Run pytest-workflow
0s
Complete job
0s