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vcf2maf v1.6.8
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@ckandoth ckandoth released this 01 Sep 22:11
v1.6.8
0b9fc73
  • Support for VEP v85
  • Consequence is now a comma-delimited list of all possible effects on the canonical isoform
  • Better handling of reference allele mismatches in maf2vcf and vcf2maf
  • New MAF column flanking_bps gives sequence context
  • New MAF columns variant_id and variant_qual for ID and QUAL from a VCF
  • New vcf2maf option --retain-info to retain data from VCF's INFO fields
  • Renamed column STRAND to STRAND_VEP to avoid mix-up with MAF's Strand
  • Added a basic dockerfile
  • Other bug fixes
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