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Update dragen_csv_to_html.py
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darrelln32 committed Jan 27, 2025
1 parent 9f8fc97 commit 0ccbe90
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions scripts/dragen_csv_to_html.py
Original file line number Diff line number Diff line change
Expand Up @@ -25,8 +25,8 @@ def build_lane_summary_html(demux_reports_dir, write_to_file):
for i in range(1, lane_number + 1):
df_name = "top_unknown_lane" + str(i)
df_by_lanes[df_name] = top_unknown_barcodes_csv_covert.loc[top_unknown_barcodes_csv_covert["Lane"] == i]
if not df_by_lanes[df_name]["index"].isnull().values.any():
df_by_lanes[df_name]["index2"] = df_by_lanes[df_name]["index2"].str.cat(df_by_lanes[df_name]["index"], sep="-")
if not df_by_lanes[df_name]["index2"].isnull().values.any():
df_by_lanes[df_name]["index"] = df_by_lanes[df_name]["index"].str.cat(df_by_lanes[df_name]["index2"], sep="-")
df_by_lanes[df_name] = df_by_lanes[df_name].drop("index2", axis=1)
# format two tables in the html with different column headers
with open(write_to_file, 'w') as _file:
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