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🩹 Fix bad ports #102

Merged
merged 8 commits into from
Jun 2, 2024
Merged

🩹 Fix bad ports #102

merged 8 commits into from
Jun 2, 2024

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s-weigand
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This PR fixes some errors discovered in the ports of examples for staging (introduced in #101).

Change summary

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  • ✔️ Passing the tests (mandatory for all PR's)

s-weigand and others added 6 commits June 1, 2024 23:08
Added dataset scale parameters experiment in the simultaneous_analysis_3d_nodisp.
Each dataset now has its own scale parameter.
TRF needs a minimum of 9 iterations to fully optimize.

From comments in script:
```py
    maximum_number_function_evaluations=9,  # TRF needs 8m LM needs 127
    # optimization_method="Levenberg-Marquardt", #LM needs nfev=127
```
🧰 Use ruff
🧰👌 Strip papermill notebook meta data
This adds the id and metadata.tags metadata, but this should be a one time thin and not cause further diffs in the furure.
And ofc there were also some formatting changes.
@jsnel jsnel marked this pull request as ready for review June 2, 2024 00:42
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Reviewed and tested together.

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@jsnel jsnel merged commit 5c7b124 into staging_rewrite Jun 2, 2024
16 of 17 checks passed
jsnel pushed a commit to glotaran/pyglotaran that referenced this pull request Jun 2, 2024
…1462)

With this change the integration tests used the examples ported to the staging syntax (see glotaran/pyglotaran-examples#101 and glotaran/pyglotaran-examples#102)

Change summary
🚇 Use pyglotaran-examples@staging_rewrite for CI integration tests
jsnel pushed a commit to jsnel/pyglotaran that referenced this pull request Jun 2, 2024
…lotaran#1462)

With this change the integration tests used the examples ported to the staging syntax (see glotaran/pyglotaran-examples#101 and glotaran/pyglotaran-examples#102)

Change summary
🚇 Use pyglotaran-examples@staging_rewrite for CI integration tests
@s-weigand s-weigand deleted the fix-bad-ports branch June 8, 2024 13:39
@s-weigand s-weigand mentioned this pull request Jun 8, 2024
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2 participants