Quality of life improvements for Bioinformatics in Python.
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pip install fgpyo
Requires python 3.9+
See documentation on fgpyo.readthedocs.org.
Poetry is used to manage the python development environment.
A simple way to create an environment with the desired version of python and poetry is to use conda. E.g.:
conda create -n fgpyo -c conda-forge "python>=3.9" poetry
conda activate fgpyo
# --all-extras is required to install `mkdocs` and associated dependencies,
# which are required for development
poetry install --all-extras