v1.0.0

This is the first release version of the mustache command-line tool, as it was implemented when the initial preprint was published. Refer to this preprint for more information:

Durrant, Matthew, Michelle M. Li, Benjamin Siranosian, and Ami S. Bhatt. 2019. "Mobile Genetic Element Insertions Drive Antibiotic Resistance across Pathogens. bioRxiv. https://doi.org/10.1101/527788

v0.2

This version of mustache was based primarily around alignment-anchored assembly, and was not equipped to handle single-end. I hope to incorporate ideas from PanISa in the next version, and making it compatible with single-end libraries.

v0.1

Implemented my own assembly in python. It got messy and had errors. May have useful code for the future.