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@Microbial-Ecology-Group

Microbial-Ecology-Group

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  1. AMRplusplus AMRplusplus Public

    AMR++ is a bioinformatic pipeline meant to aid in the analysis of raw sequencing reads to characterize the profile of antimicrobial resistance genes, or resistome.

    Nextflow 31 12

  2. AMRplusplus_bioinformatic_workshop AMRplusplus_bioinformatic_workshop Public

    R 6 2

  3. Antimicrobial-drug-use-effect-on-microbiome-and-resistome-of-beef-feedlots Antimicrobial-drug-use-effect-on-microbiome-and-resistome-of-beef-feedlots Public

    This repository contains all of the code required to replicate the analysis in the manuscript "METAGENOMIC INVESTIGATION OF THE EFFECTS OF ANTIMICROBIAL DRUG USE PRACTICES ON THE MICROBIOME AND RES…

    R 2

  4. Bioinformatics_resources Bioinformatics_resources Public

    R 2 1

  5. megares-db megares-db Public

    Java 1

  6. Guelph_calf_diarrhea_metagenomic_analyses Guelph_calf_diarrhea_metagenomic_analyses Public

    R

Repositories

Showing 10 of 18 repositories
  • vero-research Public
    Microbial-Ecology-Group/vero-research’s past year of commit activity
    HTML 0 0 0 0 Updated Jan 22, 2025
  • Bioinformatics_tools Public

    Repository for VERO bioinformatics tools

    Microbial-Ecology-Group/Bioinformatics_tools’s past year of commit activity
    R 0 MIT 0 0 0 Updated Jan 13, 2025
  • Microbial-Ecology-Group/ICASA_liver_abscess_manuscript_code’s past year of commit activity
    R 0 0 0 0 Updated Jan 7, 2025
  • Microbial-Ecology-Group/VARIANTplusplus’s past year of commit activity
    Nextflow 0 MIT 0 0 0 Updated Dec 10, 2024
  • Microbial-Ecology-Group/FDA_liver_abscess_trial’s past year of commit activity
    R 0 GPL-3.0 0 0 0 Updated Dec 2, 2024
  • Microbial-Ecology-Group/Full_GI_manuscript_code’s past year of commit activity
    R 0 MIT 0 0 0 Updated Dec 2, 2024
  • AMRplusplus Public

    AMR++ is a bioinformatic pipeline meant to aid in the analysis of raw sequencing reads to characterize the profile of antimicrobial resistance genes, or resistome.

    Microbial-Ecology-Group/AMRplusplus’s past year of commit activity
    Nextflow 31 GPL-3.0 12 17 2 Updated Nov 26, 2024
  • Manuscript-Mh_TE_validation Public

    Repository for results and R code used in the manuscript...

    Microbial-Ecology-Group/Manuscript-Mh_TE_validation’s past year of commit activity
    0 0 0 0 Updated Jan 11, 2024
  • Microbial-Ecology-Group/TE_inputDNA_manuscript_code’s past year of commit activity
    0 0 0 0 Updated Jul 12, 2023
  • Microbial-Ecology-Group/PetRisk_manuscript_code’s past year of commit activity
    HTML 0 MIT 0 0 0 Updated Jun 28, 2023

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