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Use case examples #33

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e09856e
example_1 generation
bioinfwithjudith Sep 27, 2023
f0d3392
example 1 update
bioinfwithjudith Oct 5, 2023
7c425a2
Merge branch 'main' of https://github.com/KoslickiLab/YACHT into use_…
bioinfwithjudith Oct 5, 2023
eed232f
more use case examples
bioinfwithjudith Oct 5, 2023
6e1cb4d
use-case-example.md
bioinfwithjudith Oct 12, 2023
d40b381
use-case-example.md
bioinfwithjudith Oct 12, 2023
7a343fd
use-case-example.md
bioinfwithjudith Oct 12, 2023
a811474
use-case-example.md
bioinfwithjudith Oct 12, 2023
64d9316
use-case-example.md
bioinfwithjudith Oct 12, 2023
7fc01b9
use-case-example.md
bioinfwithjudith Oct 12, 2023
fbff66d
use-case-example.md
bioinfwithjudith Oct 12, 2023
32bddd4
use-case-example.md
bioinfwithjudith Oct 12, 2023
8e3caca
use-case-example.md
bioinfwithjudith Oct 12, 2023
379493f
use-case-example.md
bioinfwithjudith Oct 12, 2023
0da7e10
pathogen detection literature update
bioinfwithjudith Oct 17, 2023
f044cc7
update
bioinfwithjudith Oct 19, 2023
961ce4c
update
bioinfwithjudith Oct 19, 2023
ea440de
update on pathogen detection description
bioinfwithjudith Oct 30, 2023
bc8afec
pathogen detection use case example prep
bioinfwithjudith Nov 1, 2023
d437966
create toy dataset for lung sample
bioinfwithjudith Nov 7, 2023
2f20f8b
pathogen_detection_example.md
bioinfwithjudith Nov 7, 2023
4cceca2
updating example
bioinfwithjudith Nov 8, 2023
7ef5e71
update
bioinfwithjudith Nov 8, 2023
bab2191
update
bioinfwithjudith Nov 8, 2023
f16ebab
update
bioinfwithjudith Nov 8, 2023
17b3eb7
reduced ani on k15 example
bioinfwithjudith Nov 8, 2023
7c9fdd1
update
bioinfwithjudith Nov 9, 2023
6240cff
adding example for cross contamination
bioinfwithjudith Nov 17, 2023
3936e2a
updated title of markdown
bioinfwithjudith Nov 17, 2023
b0286aa
updated title of markdown
bioinfwithjudith Nov 17, 2023
772c459
add figure for well tray
bioinfwithjudith Nov 17, 2023
c3cc89b
update
bioinfwithjudith Nov 28, 2023
956d661
update
bioinfwithjudith Nov 28, 2023
f356dbd
Merge branch 'main' into use_case_examples
mfl15 Dec 19, 2023
b0ac652
Merge branch 'main' into use_case_examples
dkoslicki Jan 25, 2024
ab6e32e
update commands
bioinfwithjudith Feb 14, 2024
711fb6d
update commands
bioinfwithjudith Feb 16, 2024
24e9f98
use case I added
bioinfwithjudith Jan 30, 2025
e94073e
adding a script to easily download data required for this use case ex…
bioinfwithjudith Jan 30, 2025
818daa1
results from example
bioinfwithjudith Jan 30, 2025
e17d791
minor modifications to markdown
bioinfwithjudith Jan 30, 2025
28259fa
modifications to show code blocks
bioinfwithjudith Jan 30, 2025
6066542
README file for MAG fishing
bioinfwithjudith Feb 20, 2025
3b462cc
updating mag fishing use case example
bioinfwithjudith Feb 20, 2025
f065a66
version 2 of README file
bioinfwithjudith Feb 20, 2025
ba8bbf6
figure for README_V2
bioinfwithjudith Feb 20, 2025
eb73b9d
update use case example
bioinfwithjudith Feb 21, 2025
e919f80
updated data download script
bioinfwithjudith Feb 21, 2025
88f8d7e
updated data_download file
bioinfwithjudith Feb 21, 2025
6ed5ea0
update use case example
bioinfwithjudith Feb 24, 2025
ae59fa7
remove old content
bioinfwithjudith Feb 24, 2025
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Merge branch 'main' of https://github.com/KoslickiLab/YACHT into use_…
…case_examples
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bioinfwithjudith committed Oct 5, 2023
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