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Use case examples#33

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mfl15 wants to merge 42 commits intomainKoslickiLab/YACHT:mainfrom use_case_examplesKoslickiLab/YACHT:use_case_examplesCopy head branch name to clipboard

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Commits on Sep 27, 2023

• example_1 generation

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Commits on Oct 5, 2023

• example 1 update

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• Merge branch 'main' of https://github.com/KoslickiLab/YACHT into use_case_examples

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• more use case examples

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Commits on Oct 12, 2023

• use-case-example.md

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• use-case-example.md

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• use-case-example.md

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• use-case-example.md

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• use-case-example.md

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• use-case-example.md

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• use-case-example.md

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• use-case-example.md

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• use-case-example.md

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Commits on Oct 17, 2023

• pathogen detection literature update

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• update

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• update

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Commits on Oct 30, 2023

• update on pathogen detection description

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Commits on Nov 1, 2023

• pathogen detection use case example prep

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Commits on Nov 7, 2023

• create toy dataset for lung sample

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• pathogen_detection_example.md

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• updating example

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• update

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• reduced ani on k15 example

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Commits on Nov 9, 2023

• update

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Commits on Nov 17, 2023

• adding example for cross contamination

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• updated title of markdown

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• updated title of markdown

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• add figure for well tray

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• update

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• update

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• Merge branch 'main' into use_case_examples

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Commits on Jan 25, 2024

• Merge branch 'main' into use_case_examples

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Commits on Feb 14, 2024

• update commands

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• update commands

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Commits on Jan 30, 2025

• use case I added

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• adding a script to easily download data required for this use case example

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• results from example

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• minor modifications to markdown

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• modifications to show code blocks

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