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added check gha action #32 #6

added check gha action #32

added check gha action #32 #6

Triggered via pull request October 30, 2024 08:00
Status Failure
Total duration 36m 44s
Artifacts 3

rworkflows.yml

on: pull_request
Matrix: rworkflows
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8 errors and 22 warnings
windows-latest (auto)
R CMD check found WARNINGs
windows-latest (auto)
Process completed with exit code 1.
windows-latest (auto)
[Workflow Telemetry] Couldn't find current job. So action will not report any data.
ubuntu-latest (auto)
Process completed with exit code 1.
ubuntu-latest (auto)
[Workflow Telemetry] Couldn't find current job. So action will not report any data.
macOS-latest (auto)
R CMD check found WARNINGs
macOS-latest (auto)
Process completed with exit code 1.
macOS-latest (auto)
[Workflow Telemetry] Couldn't find current job. So action will not report any data.
windows-latest (auto)
dependencies 'BiocVersion', 'BiocStyle' are not available
windows-latest (auto)
C:/Users/runneradmin/AppData/Local/Temp/RtmpULSxVo/Rbuild74c49984c10/MolEvolvR/man/combineFiles.Rd:23: unknown macro '\t'
windows-latest (auto)
C:/Users/runneradmin/AppData/Local/Temp/RtmpW0IsTZ/R.INSTALL13b023606e10/MolEvolvR/man/combineFiles.Rd:23: unknown macro '\t'
windows-latest (auto)
C:/Users/runneradmin/AppData/Local/Temp/RtmpW868aO/Rbuild184016f378f2/MolEvolvR/man/combineFiles.Rd:23: unknown macro '\t'
windows-latest (auto)
Namespaces in Imports field not imported from:
windows-latest (auto)
prepare_Rd: ./man/combineFiles.Rd:23: unknown macro '\t'
windows-latest (auto)
Missing link or links in Rd file 'getIPRScanColTypes.Rd':
windows-latest (auto)
Undocumented data sets:
windows-latest (auto)
Functions or methods with usage in Rd file 'convert2TitleCase.Rd' but not in code:
windows-latest (auto)
Documented arguments not in \usage in Rd file 'IPG2Lineage.Rd':
ubuntu-latest (auto)
The following actions use a deprecated Node.js version and will be forced to run on node20: runforesight/workflow-telemetry-action@v1, actions/cache@v3, actions/upload-artifact@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
Deprecation notice: v1, v2, and v3 of the artifact actions
The following artifacts were uploaded using a version of actions/upload-artifact that is scheduled for deprecation: "Linux-biocversion-devel-r-auto-results", "macOS-biocversion-devel-r-auto-results", "Windows-biocversion-devel-r-auto-results". Please update your workflow to use v4 of the artifact actions. Learn more: https://github.blog/changelog/2024-04-16-deprecation-notice-v3-of-the-artifact-actions/
macOS-latest (auto)
harfbuzz 10.0.1_1 is already installed and up-to-date. To reinstall 10.0.1_1, run: brew reinstall harfbuzz
macOS-latest (auto)
fribidi 1.0.16 is already installed and up-to-date. To reinstall 1.0.16, run: brew reinstall fribidi
macOS-latest (auto)
macOS's Gatekeeper has been disabled for this Cask
macOS-latest (auto)
dependencies ‘BiocVersion’, ‘BiocStyle’ are not available
macOS-latest (auto)
/private/var/folders/g6/rgtlsw6n123b0gt5483s5_cm0000gn/T/Rtmp712g48/Rbuild2faa179bc79e/MolEvolvR/man/combineFiles.Rd:23: unknown macro '\t'
macOS-latest (auto)
/private/var/folders/g6/rgtlsw6n123b0gt5483s5_cm0000gn/T/RtmpX0jKuw/R.INSTALL2fbf2eb797d0/MolEvolvR/man/combineFiles.Rd:23: unknown macro '\t'
macOS-latest (auto)
/private/var/folders/g6/rgtlsw6n123b0gt5483s5_cm0000gn/T/Rtmp50dWvG/Rbuild318c50577905/MolEvolvR/man/combineFiles.Rd:23: unknown macro '\t'
macOS-latest (auto)
Namespaces in Imports field not imported from:
macOS-latest (auto)
prepare_Rd: ./man/combineFiles.Rd:23: unknown macro '\t'
macOS-latest (auto)
Missing link or links in Rd file 'getIPRScanColTypes.Rd':

Artifacts

Produced during runtime
Name Size
Linux-biocversion-devel-r-auto-results Expired
1.28 MB
Windows-biocversion-devel-r-auto-results Expired
1.3 MB
macOS-biocversion-devel-r-auto-results Expired
1.28 MB