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@Elembio

Element Biosciences

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  1. AvidityManuscript2023 AvidityManuscript2023 Public

    Jupyter Notebook 4

  2. .github .github Public

    Element Biosciences

  3. MultiQC MultiQC Public

    Forked from MultiQC/MultiQC

    Aggregate results from bioinformatics analyses across many samples into a single report.

    Python

  4. MultiQC_TestData MultiQC_TestData Public

    Forked from MultiQC/test-data

    Test data for MultiQC. See https://github.com/ewels/MultiQC

    HTML

  5. bases2fastq-nf bases2fastq-nf Public

    Bases2fastq-nf is a bioinformatics pipeline used to demultiplex the raw data produced by the Element AVITI™ System using the Bases2Fastq Software.

    Nextflow 1

  6. loop-core loop-core Public

    Rust 2

Repositories

Showing 10 of 12 repositories
  • bases2fastq-nf Public

    Bases2fastq-nf is a bioinformatics pipeline used to demultiplex the raw data produced by the Element AVITI™ System using the Bases2Fastq Software.

    Elembio/bases2fastq-nf’s past year of commit activity
    Nextflow 0 Apache-2.0 1 0 0 Updated Jan 8, 2025
  • configs Public

    custom elembio specific nextflow configs

    Elembio/configs’s past year of commit activity
    Nextflow 0 Apache-2.0 0 0 0 Updated Dec 13, 2024
  • cytoprofiling Public

    Python and R libraries for processing cytoprofiling datasets from Element Biosciences

    Elembio/cytoprofiling’s past year of commit activity
    Python 0 BSD-3-Clause 0 0 0 Updated Dec 9, 2024
  • sentieon-cli-nf Public

    Elembio Catalyst nextflow wrapper for sentieon-cli

    Elembio/sentieon-cli-nf’s past year of commit activity
    Groovy 0 BSD-2-Clause 0 0 0 Updated Dec 7, 2024
  • parabricks-nextflow Public Forked from clara-parabricks-workflows/parabricks-nextflow

    Accelerated genomics workflows in NextFlow

    Elembio/parabricks-nextflow’s past year of commit activity
    Roff 0 Apache-2.0 9 0 0 Updated Dec 7, 2024
  • cells2stats-nf Public

    Cells2stats-nf is a bioinformatics pipeline used to assign reads and generate cell statistics from the raw data produced by the Element AVITI24™ System using the Cells2Stats Software.

    Elembio/cells2stats-nf’s past year of commit activity
    Nextflow 0 0 0 0 Updated Dec 2, 2024
  • loop-core Public
    Elembio/loop-core’s past year of commit activity
    Rust 0 BSD-3-Clause 2 0 1 Updated May 16, 2024
  • bases2fastq-dx Public

    Bases2fastq-dx is A DNAnexus applet for building a DNAnexus bioinformatics workflow used to demultiplex the raw data produced by the Element AVITI™ System using the Bases2Fastq Software.

    Elembio/bases2fastq-dx’s past year of commit activity
    Shell 0 Apache-2.0 0 0 0 Updated Mar 26, 2024
  • MultiQC Public Forked from MultiQC/MultiQC

    Aggregate results from bioinformatics analyses across many samples into a single report.

    Elembio/MultiQC’s past year of commit activity
    Python 0 GPL-3.0 611 0 0 Updated Aug 28, 2023
  • MultiQC_TestData Public Forked from MultiQC/test-data

    Test data for MultiQC. See https://github.com/ewels/MultiQC

    Elembio/MultiQC_TestData’s past year of commit activity
    HTML 0 MIT 146 0 0 Updated Aug 17, 2023
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