-
EGA DAC metadata schema –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.DAC.json -
EGA Experiment metadata schema –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.experiment.json -
EGA analysis metadata schema –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.analysis.json -
EGA assay metadata schema –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.assay.json -
EGA common metadata definitions –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json -
EGA dataset metadata schema –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.dataset.json -
EGA individual metadata schema –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.individual.json -
EGA object-set metadata schema –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.object-set.json -
EGA policy metadata schema –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.policy.json -
EGA protocol metadata schema –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.protocol.json -
EGA sample metadata schema –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.sample.json -
EGA study metadata schema –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.study.json -
EGA submission metadata schema –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.submission.json
-
Alternate gene identifier item –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/geneDescriptor/properties/alternateGeneIdentifiers/items -
Analysis type specifications –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.analysis.json#/properties/analysisTypeSpecifications -
Array label identifier –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/arrayLabel/properties/arrayLabelIdentifier -
Assay technology –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/assayTechnologyDescriptor -
Assay type specifications –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.assay.json#/properties/assayTypeSpecifications -
Assayed biological macromolecule –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.experiment.json#/properties/assayedBiologicalMacromolecule -
Basecall –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/spotDescriptor/items/properties/readSpecs/items/properties/expectedBasecallTable/properties/basecalls/items -
Cell type –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/cellType -
Cell type –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.sample.json#/properties/cellTypes/items -
Check that the objectId's accession pattern and objectType match –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/objectIdAndObjectTypeCheck -
Check: allowed filetypes for an assay –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/assayFiletypes -
Check: checksum checks based on its method –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/checksumPatternCheck -
Check: filetype checks based on its filename –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/filenameFiletypePatternCheck -
Collaborator –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.submission.json#/properties/additionalCollaborators/items -
Contact details –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/contactDetails -
Core identifiers of an object –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/objectCoreId -
Custom attribute of an object –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/customAttribute -
DAC contacts' details –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.DAC.json#/properties/dacContacts -
Data Use Ontology (DUO) –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.policy.json#/properties/duoCodes/items -
Disease –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/disease -
Disease item –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.individual.json#/properties/minimalPublicAttributes/properties/diseases/items -
EGA File object –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/fileObject -
EGA Relationships object –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/relationshipObject -
Expected basecall table –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/spotDescriptor/items/properties/readSpecs/items/properties/expectedBasecallTable -
Experiment type specifications –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.experiment.json#/properties/experimentTypeSpecifications -
File content item –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/fileObject/properties/fileContent/items -
Gene descriptor –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/geneDescriptor -
Gene identifier –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/geneDescriptor/properties/geneIdentifier -
Genomic sequence descriptor –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/genomicSequenceDescriptor -
Identifier of the external accession –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/objectExternalAccession/properties/objectExternalAccessionIdentifier -
Individual's age at sample collection –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.sample.json#/properties/sampleCollection/properties/ageAtCollection -
Individual's age range at sample collection –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.sample.json#/properties/sampleCollection/properties/ageAtCollection/properties/ageRange -
Locus context item –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/locusIdentifier/properties/lociDescriptor/items -
Locus identifier –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/locusIdentifier -
Material anatomical entity –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/materialAnatomicalEntity -
Minimal public attributes describing an individual –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.individual.json#/properties/minimalPublicAttributes -
NCBI Assembly –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/ncbiAssemblyDescriptor/properties/ncbiAssembly -
NCBI Taxon of the organism –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/organismDescriptor/properties/organismTaxon -
NCBI assembly unit –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/ncbiAssemblyDescriptor/properties/ncbiAssemblyUnit -
NCBI's Assembly descriptor –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/ncbiAssemblyDescriptor -
Object External accession –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/objectExternalAccession -
Object's IDs block –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.DAC.json#/properties/objectId -
Object's IDs block –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.analysis.json#/properties/objectId -
Object's IDs block –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.assay.json#/properties/objectId -
Object's IDs block –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/sampleLabelAssociation/properties/objectId -
Object's IDs block –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.dataset.json#/properties/objectId -
Object's IDs block –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.experiment.json#/properties/objectId -
Object's IDs block –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.individual.json#/properties/objectId -
Object's IDs block –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.study.json#/properties/objectId -
Object's IDs block –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.sample.json#/properties/objectId -
Object's IDs block –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.submission.json#/properties/objectId -
Object's IDs block –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.policy.json#/properties/objectId -
Object's IDs block –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.protocol.json#/properties/objectId -
Ontology term –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/ontologyTerm -
Organism [OBI:0100026] descriptor block –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/organismDescriptor -
Phenotypic abnormality –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/phenotypicAbnormality -
Phenotypic abnormality item –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.individual.json#/properties/minimalPublicAttributes/properties/phenotypicAbnormalities/items -
Policy descriptor –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.policy.json#/properties/policyDescriptor -
Protocol type descriptor –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.protocol.json#/properties/protocolTypeDescriptor -
Read spec –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/spotDescriptor/items/properties/readSpecs/items -
Related gene identifier item –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/geneDescriptor/properties/relatedGeneIdentifiers/items -
Relationship source: DAC –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/rSourceDAC -
Relationship source: Policy –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/rSourcePolicy -
Relationship source: analysis –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/rSourceAnalysis -
Relationship source: assay –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/rSourceAssay -
Relationship source: dataset –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/rSourceDataset -
Relationship source: experiment –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/rSourceExperiment -
Relationship source: externalAccession –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/rSourceExternalAccession -
Relationship source: externalURL –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/rSourceExternalURL -
Relationship source: individual –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/rSourceIndividual -
Relationship source: protocol –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/rSourceProtocol -
Relationship source: sample –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/rSourceSample -
Relationship source: study –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/rSourceStudy -
Relationship source: submission –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/rSourceSubmission -
Relationship target: DAC –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/rTargetDAC -
Relationship target: Policy –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/rTargetPolicy -
Relationship target: analysis –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/rTargetAnalysis -
Relationship target: assay –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/rTargetAssay -
Relationship target: dataset –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/rTargetDataset -
Relationship target: experiment –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/rTargetExperiment -
Relationship target: externalAccession –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/rTargetExternalAccession -
Relationship target: externalURL –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/rTargetExternalURL -
Relationship target: individual –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/rTargetIndividual -
Relationship target: protocol –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/rTargetProtocol -
Relationship target: sample –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/rTargetSample -
Relationship target: study –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/rTargetStudy -
Relationship target: submission –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/rTargetSubmission -
Relationship type: childOf –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/rTypeChildOf -
Relationship type: developsFrom –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/rTypeDevelopsFrom -
Relationship type: familyRelationshipWith –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/rTypeFamilyRelationshipWith -
Relationship type: groupedWith –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/rTypeGroupedWith -
Relationship type: isAfter –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/rTypeIsAfter -
Relationship type: memberOf –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/rTypeMemberOf -
Relationship type: referencedBy –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/rTypeReferencedBy -
Relationship type: sameAs –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/rTypeSameAs -
Relationship's object (either source or target) –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/oneRelationshipEnd -
Relationship's object's IDs block –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/oneRelationshipEnd/properties/objectId -
Relative order –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/spotDescriptor/items/properties/readSpecs/items/properties/relativeOrder -
Repeatable Sample-label node –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/sampleLabelAssociation -
Repeatable arrayLabel node –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/arrayLabel -
Resource –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.submission.json#/properties/resources/items -
Sample collection descriptor –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.sample.json#/properties/sampleCollection -
Sample condition –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.sample.json#/properties/sampleStatus/items/properties/conditionUnderStudy -
Sample group descriptor –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.sample.json#/properties/sampleGrouping -
Sample status item –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.sample.json#/properties/sampleStatus/items -
Sampling site –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.sample.json#/properties/sampleCollection/properties/samplingSite -
Schema descriptor –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/schemaDescriptor -
Sequence coordinates –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/sequenceCoordinates -
Sequence interval –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/sequenceCoordinates/properties/sequenceInterval -
Sequence quality details –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/fileObject/properties/sequenceQualityDetails -
Source of the relationship –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/relationshipObject/properties/rSource -
Specifications of a sequencing assay –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.assay.json#/properties/assayTypeSpecifications/properties/sequencingAssaySpecifications -
Specifications of a sequencing experiment –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.experiment.json#/properties/experimentTypeSpecifications/properties/sequencingExperiment -
Specifications of an array assay –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.assay.json#/properties/assayTypeSpecifications/properties/arrayAssaySpecifications -
Specifications of an array experiment –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.experiment.json#/properties/experimentTypeSpecifications/properties/arrayExperiment -
Spot decode spec –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/spotDescriptor/items -
Subtype of the protocol –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.protocol.json#/properties/protocolTypeDescriptor/properties/protocolSubtype -
Target of the relationship –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/relationshipObject/properties/rTarget -
Type of used assay –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.experiment.json#/properties/assayType
-
Additional DAC contacts' details –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.DAC.json#/properties/dacContacts/properties/additionalContacts -
Alternate gene identifiers –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/geneDescriptor/properties/alternateGeneIdentifiers -
Analysis custom attributes –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.analysis.json#/properties/analysisAttributes -
Analysis relationships –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.analysis.json#/properties/analysisRelationships -
Array Design Format (ADF) [NCIT:C172213] file block –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.experiment.json#/properties/experimentTypeSpecifications/properties/arrayExperiment/properties/adfFiles -
Array containing metadata objects –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.object-set.json#/properties/objectArray -
Array label of the experiment –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.experiment.json#/properties/experimentTypeSpecifications/properties/arrayExperiment/properties/arrayLabels -
Array of cell types –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.sample.json#/properties/cellTypes -
Array of diseases –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.individual.json#/properties/minimalPublicAttributes/properties/diseases -
Array of phenotypic abnormalities –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.individual.json#/properties/minimalPublicAttributes/properties/phenotypicAbnormalities -
Array of sample statuses –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.sample.json#/properties/sampleStatus -
Array of sample types –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.sample.json#/properties/sampleTypes -
Array of sampleLabel pairs of the array assay –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.assay.json#/properties/assayTypeSpecifications/properties/arrayAssaySpecifications/properties/arraySampleLabels -
Assay custom attributes –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.assay.json#/properties/assayAttributes -
Assay relationships –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.assay.json#/properties/assayRelationships -
Basecalls array –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/spotDescriptor/items/properties/readSpecs/items/properties/expectedBasecallTable/properties/basecalls -
DAC custom attributes –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.DAC.json#/properties/dacAttributes -
DAC relationships –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.DAC.json#/properties/dacRelationships -
Data Use Ontology (DUO) codes –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.policy.json#/properties/duoCodes -
Data files produced from an assay –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.assay.json#/properties/assayFiles -
Dataset custom attributes –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.dataset.json#/properties/datasetAttributes -
Dataset relationships –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.dataset.json#/properties/datasetRelationships -
Experiment custom attributes –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.experiment.json#/properties/experimentAttributes -
Experiment relationships –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.experiment.json#/properties/experimentRelationships -
External accessions array –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/objectCoreId/properties/externalAccessions -
File content array –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/fileObject/properties/fileContent -
Files of the analysis –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.analysis.json#/properties/analysisFiles -
Individual custom attributes –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.individual.json#/properties/individualAttributes -
Individual relationships –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.individual.json#/properties/individualRelationships -
List of analysis types –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.analysis.json#/properties/analysisTypeSpecifications/properties/analysisTypes -
Loci context array –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/locusIdentifier/properties/lociDescriptor -
Loci of the targeted genomic feature –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.analysis.json#/properties/targetedLoci -
Loci of the targeted genomic feature –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.experiment.json#/properties/targetedLoci -
Policy custom attributes –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.policy.json#/properties/policyAttributes -
Policy relationships –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.policy.json#/properties/policyRelationships -
Protocol custom attributes –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.protocol.json#/properties/protocolAttributes -
Protocol instrument array –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.protocol.json#/properties/protocolInstruments -
Protocol performers array –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.protocol.json#/properties/protocolPerformers -
Protocol relationships –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.protocol.json#/properties/protocolRelationships -
Protocol software array –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.protocol.json#/properties/protocolSoftware -
Read specs –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/spotDescriptor/items/properties/readSpecs -
Reference assembly and sequence details –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/referenceAlignmentDetails -
Related (not equivalent) gene identifiers –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/geneDescriptor/properties/relatedGeneIdentifiers -
Resources (ontologies) –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.submission.json#/properties/resources -
Sample custom attributes –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.sample.json#/properties/sampleAttributes -
Sample relationships –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.sample.json#/properties/sampleRelationships -
Spot descriptor –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/spotDescriptor -
Study custom attributes –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.study.json#/properties/studyAttributes -
Study relationships –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.study.json#/properties/studyRelationships -
Submission collaborator details –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.submission.json#/properties/additionalCollaborators -
Submission custom attributes –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.submission.json#/properties/submissionAttributes -
Submission relationships –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.submission.json#/properties/submissionRelationships -
Types of input data –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.analysis.json#/properties/typesOfInputData -
Types of output data –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.analysis.json#/properties/typesOfOutputData -
Types of output data –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.experiment.json#/properties/typesOfOutputData -
studyDesigns array –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.study.json#/properties/studyDesigns -
studyTypes array –
https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.study.json#/properties/studyTypes
The schemas linked above follow the JSON Schema Spec version: https://json-schema.org/draft/2019-09/schema