ega-4-defs-ncbis-assembly-descriptor-properties-ncbi-assembly.md

NCBI Assembly Schema

https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.common-definitions.json#/$defs/ncbiAssemblyDescriptor/properties/ncbiAssembly

Node defining an Assembly (e.g. 'GCF_000001405.26'). For example, the assembly accession for the GenBank version of the public human reference assembly ('termLabel' being 'GRCh38.p14') is 'GCA_000001405.29' ('termId'). See further details here: https://www.ncbi.nlm.nih.gov/assembly/model/.

Abstract	Extensible	Status	Identifiable	Custom Properties	Additional Properties	Access Restrictions	Defined In
Can be instantiated	No	Unknown status	No	Forbidden	Allowed	none	EGA.common-definitions.json*

ncbiAssembly Type

object (NCBI Assembly)

all of

• Ontology term

ncbiAssembly Properties

Property	Type	Required	Nullable	Defined by
termId	Merged	Optional	cannot be null	EGA common metadata definitions

termId

termId

• is optional

• Type: merged type (Ontology constraints for this specific termId)

• cannot be null

• defined in: EGA common metadata definitions

termId Type

merged type (Ontology constraints for this specific termId)

all of

• all of

  • Compact URI (CURIE) pattern

termId Examples

"assembly:GCF_000001405.26"

"assembly:GCA_000001405.1"

"assembly:GCF_000005845.2"