Merge branch '136-fix-merge_tablesr-fails-if-given-empty-input' of gi…

…thub.com:zavolanlab/mirflowz into 136-fix-merge_tablesr-fails-if-given-empty-input
zavolanlab · Feb 25, 2024 · fd7aa10 · fd7aa10
2 parents 09b1284 + 775a234
commit fd7aa10
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/workflow/rules/pileup.smk b/workflow/rules/pileup.smk
@@ -141,7 +141,7 @@ rule create_per_library_ascii_pileups:
     params:
         cluster_log=CLUSTER_LOG / "pileups_{sample}.log",
         out_dir=lambda wildcards: expand(
-            PILEUP_DIR / "{sample}", sample=pd.unique(samples_table.index.values)
+            PILEUP_DIR / "{sample}", sample=[wildcards.sample]
         ),
         prefix="{sample}",
     log: