Change float to string #201
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
name: dryad_build | |
on: [push] | |
jobs: | |
run-check: | |
if: "contains(github.event.head_commit.message, '[ci]')" | |
runs-on: ubuntu-latest | |
env: | |
NXF_VER: 21.07.0-edge | |
defaults: | |
run: | |
shell: bash | |
steps: | |
- name: Check out pipeline code | |
uses: actions/checkout@v2 | |
- name: Configure AWS credentials | |
uses: aws-actions/configure-aws-credentials@v1 | |
with: | |
aws-access-key-id: ${{ secrets.AWS_ACCESS_KEY_ID }} | |
aws-secret-access-key: ${{ secrets.AWS_SECRET_ACCESS_KEY }} | |
aws-region: us-east-2 | |
- name: Cache Nextflow Version | |
uses: actions/cache@v2 | |
with: | |
path: ~/.nextflow | |
key: ${{ runner.os }}-build-${{ env.NXF_VER }} | |
- name: Get Nextflow | |
run: curl -s https://get.nextflow.io | bash | |
- name: Run Dryad with test data | |
env: | |
NCBI_API_KEY: ${{ secrets.NCBI_API_KEY }} | |
run: | | |
cd ./tests | |
../nextflow run ../main.nf --test -profile docker -c autobuild.config |