GitHub - vipints/TranscriptSkimmer: TranscriptSkimmer: Generate high confidence transcript structures from RNA-Seq data

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TranscriptSkimmer: Generate high confidence transcript structures from RNA-Seq data

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Name		Name	Last commit message	Last commit date
Latest commit History 31 Commits
src		src
utils		utils
AUTHORS		AUTHORS
README		README
run_TranSkimmer.py		run_TranSkimmer.py

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TranscriptSkimmer
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TranscriptSkimmer is a reference-guided assembler for RNASeq experiments. 
It simultaneously assembles transcripts from reads without using a reference 
annotation.  The software expects as input genome sequence in FASTA file and 
RNASeq read alignments in BAM format - binary form of SAM format.
(http://samtools.sourceforge.net)