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add na.rm = T to fix #23 #147

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lldelisle
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#23 Can happen when for example, you have cells with 0 values in any gene of vel$current. This PR uses na.rm = T to ignore these cells.

@Junedays
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Hi, I would like to know whether this correction has been incorporated in the newest version of Velocyto.R? If not how can I applied this correction?

@rekren
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rekren commented Nov 29, 2022

Hello,

I don't think the package is updated by its maintainers.

More convenient way-around solution for me was; not using velocyto.R of velocyto package, but processing .loom files through ReadVelocity() function of a wrapper and then using scVelo.

I hope it helps you, too.

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3 participants