Add the singularity ENV SINGULARITYENV_HDF5_USE_FILE_LOCKING to tool …

…default
usegalaxy-eu · Nov 28, 2024 · c7af9b3 · c7af9b3
1 parent 92f5773
commit c7af9b3
Showing 1 changed file with 2 additions and 0 deletions.
diff --git a/files/galaxy/tpv/tool_defaults.yml b/files/galaxy/tpv/tool_defaults.yml
@@ -12,6 +12,8 @@ tools:
         value: "{int(mem * 1024)}" # set 5/2023 might be moved to runner or tool wrappers, related to Galaxy issue 15952
       - name: HDF5_USE_FILE_LOCKING
         value: "FALSE"
+      - name: SINGULARITYENV_HDF5_USE_FILE_LOCKING
+        value: $HDF5_USE_FILE_LOCKING
     params:
       metadata_strategy: "extended"
       tmp_dir: true