Skip to content

Commit

Permalink
Update Galaxy tools
Browse files Browse the repository at this point in the history
  • Loading branch information
pauldg authored and github-actions[bot] committed Oct 5, 2024
1 parent f417599 commit 385f3ce
Show file tree
Hide file tree
Showing 3 changed files with 633 additions and 0 deletions.
4 changes: 4 additions & 0 deletions belgium-custom.yaml.lock
Original file line number Diff line number Diff line change
Expand Up @@ -132,6 +132,7 @@ tools:
revisions:
- 093678460093
- 5915ea1ec9b1
- 5eb7e84243f2
- aa784cb3810d
tool_panel_section_label: FASTA/FASTQ
- name: je_demultiplex
Expand Down Expand Up @@ -198,6 +199,7 @@ tools:
- name: mafft
owner: rnateam
revisions:
- 8e649f27aa0d
- bcfce5aac49c
- bf28a8cff401
- f0d493f8f84f
Expand Down Expand Up @@ -251,12 +253,14 @@ tools:
revisions:
- 09855551d713
- 28433faa6e42
- bd0e53f3a891
tool_panel_section_label: Annotation
- name: augustus_training
owner: bgruening
revisions:
- 1fbb1135da16
- dc027fa56d55
- f1e653756174
tool_panel_section_label: Annotation
- name: glimmer_build_icm
owner: bgruening
Expand Down
123 changes: 123 additions & 0 deletions tools_iuc.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -4277,3 +4277,126 @@ tools:
- name: diffbind
owner: bgruening
tool_panel_section_label: Peak Calling
- name: argnorm
owner: iuc
tool_panel_section_label: Annotation
- name: evidencemodeler
owner: iuc
tool_panel_section_label: Annotation
- name: microsatbed
owner: iuc
tool_panel_section_label: Annotation
- name: data_manager_dada2
owner: iuc
- name: data_manager_humann2_database_downloader
owner: iuc
- name: data_manager_picard_index_builder
owner: devteam
- name: ucsc_axtchain
owner: iuc
tool_panel_section_label: Convert Formats
- name: ucsc_maftoaxt
owner: iuc
tool_panel_section_label: Convert Formats
- name: ucsc_nettoaxt
owner: iuc
tool_panel_section_label: Convert Formats
- name: ucsc_netfilter
owner: iuc
tool_panel_section_label: Convert Formats
- name: ucsc_chainnet
owner: iuc
tool_panel_section_label: Convert Formats
- name: fasta_clipping_histogram
owner: devteam
tool_panel_section_label: FASTA/FASTQ
- name: name2taxid
owner: iuc
tool_panel_section_label: Metagenomic Analysis
- name: gtdb_to_taxdump
owner: iuc
tool_panel_section_label: Metagenomic Analysis
- name: biobox_add_taxid
owner: iuc
tool_panel_section_label: Metagenomic Analysis
- name: mg_toolkit_bulk_download
owner: iuc
tool_panel_section_label: Metagenomic Analysis
- name: pacu_map
owner: iuc
tool_panel_section_label: Phylogenetics
- name: pacu_snp
owner: iuc
tool_panel_section_label: Phylogenetics
- name: seurat_preprocessing
owner: iuc
tool_panel_section_label: RNA Analysis
- name: seurat_integrate
owner: iuc
tool_panel_section_label: RNA Analysis
- name: seurat_reduce_dimension
owner: iuc
tool_panel_section_label: RNA Analysis
- name: seurat_create
owner: iuc
tool_panel_section_label: RNA Analysis
- name: seurat_plot
owner: iuc
tool_panel_section_label: RNA Analysis
- name: seurat_data
owner: iuc
tool_panel_section_label: RNA Analysis
- name: seurat_clustering
owner: iuc
tool_panel_section_label: RNA Analysis
- name: cosg
owner: iuc
tool_panel_section_label: Single-cell
- name: spapros_selection
owner: iuc
tool_panel_section_label: Single-cell
- name: spapros_evaluation
owner: iuc
tool_panel_section_label: Single-cell
- name: infercnv
owner: iuc
tool_panel_section_label: Single-cell
- name: clustering_from_distmat
owner: iuc
tool_panel_section_label: Statistics
- name: beacon2_analyses
owner: iuc
tool_panel_section_label: Variant Calling
- name: beacon2_biosamples
owner: iuc
tool_panel_section_label: Variant Calling
- name: beacon2_bracket
owner: iuc
tool_panel_section_label: Variant Calling
- name: beacon2_cnv
owner: iuc
tool_panel_section_label: Variant Calling
- name: beacon2_cohorts
owner: iuc
tool_panel_section_label: Variant Calling
- name: beacon2_datasets
owner: iuc
tool_panel_section_label: Variant Calling
- name: beacon2_gene
owner: iuc
tool_panel_section_label: Variant Calling
- name: beacon2_import
owner: iuc
tool_panel_section_label: Variant Calling
- name: beacon2_individuals
owner: iuc
tool_panel_section_label: Variant Calling
- name: beacon2_range
owner: iuc
tool_panel_section_label: Variant Calling
- name: beacon2_runs
owner: iuc
tool_panel_section_label: Variant Calling
- name: beacon2_sequence
owner: iuc
tool_panel_section_label: Variant Calling
Loading

0 comments on commit 385f3ce

Please sign in to comment.