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v0.10.2#103

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jenniferjiangkells merged 52 commits intomasteruclh-criu/miade:masterfrom release-v0.10.2uclh-criu/miade:release-v0.10.2Copy head branch name to clipboardNov 15, 2023

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Commits

Commits on Jan 9, 2023

• Merge branch 'master' of https://github.com/uclh-criu/miade into dev

  

  jenniferajiang

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Commits on Jan 19, 2023

• update git tag versioning changes from #70

  

  jenniferajiang

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Commits on Jan 31, 2023

• added confidence to meta to match for API compatibility

  

  jenniferajiang

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Commits on Feb 1, 2023

• 🚨 Black

  

  jenniferajiang

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• A little manual merge? added latest updated negex meta priority for testing

  

  jenniferajiang

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Commits on Feb 17, 2023

• Merge branch 'feature/logging-config' into dev

  

  jenniferajiang

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• Merge branch 'feature/logging-config' into dev

  

  jenniferajiang

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  cce70e1

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• ✅ Updated tests

  

  jenniferajiang

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• Merge branch 'feature/logging-config' into dev

  

  jenniferajiang

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Commits on Feb 21, 2023

• Merge branch 'hotfix-negex-config' into dev

  

  jenniferajiang

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Commits on Mar 3, 2023

• Merge branch 'feature/74-blacklist-filtering' into dev

  

  jenniferajiang

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Commits on Mar 10, 2023

• Merge remote-tracking branch 'origin/feature/filter-debug-logs' into dev

  

  jenniferajiang

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Commits on Apr 21, 2023

• Pull bug fixes and medcat upgrade: Merge branch 'master' of https://github.com/uclh-criu/miade into dev

  

  jenniferajiang

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Commits on Apr 26, 2023

• Remove Debug Mode - Merge branch 'master' of https://github.com/uclh-criu/miade into dev

  

  jenniferajiang

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Commits on Apr 27, 2023

• Merge branch 'master' of https://github.com/uclh-criu/miade into dev

  

  jenniferajiang

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Commits on Jul 27, 2023

• Merge branch 'feature/48-allergy-postprocessing' into dev

  

  jenniferajiang

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  31749ac

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• Merge branch 'master' of https://github.com/uclh-criu/miade into dev

  

  jenniferajiang

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Commits on Jul 28, 2023

• Merge branch 'feature/48-allergy-postprocessing' into dev

  

  jenniferajiang

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Commits on Sep 6, 2023

• Remove converted tag

  jamesbrandreth

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Commits on Sep 7, 2023

• ⬆️ Upgrade python to 3.11

  jamesbrandreth

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Commits on Sep 22, 2023

• ✨ paragraph chunking wip

  

  jenniferajiang

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Commits on Sep 28, 2023

• Added loading regex config for paragraphs and capping problem concepts to 10

  

  jenniferajiang

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Commits on Sep 29, 2023

• Keep n dash between numbers, update tests

  

  jenniferajiang

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• ✅

  

  jenniferajiang

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• Merge branch 'feature/paragraph-chunking' into dev

  

  jenniferajiang

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Commits on Oct 2, 2023

• 🐛🔊 Fixed negex bug and added logs for paragrapher

  

  jenniferajiang

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Commits on Oct 4, 2023

• 🔊 Log message adjustments to make it more readable

  

  jenniferajiang

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• 🏗️ Changed the way annotators and negex pipelines are configured - added options to disable pipelines

  

  jenniferajiang

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  a5d3f54

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• 🐛 Fixed historic concepts with no conversion are returned as is

  

  jenniferajiang

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• ✅ forgot to commit updated tests

  

  jenniferajiang

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Commits on Oct 5, 2023

• Added error handling for config loading

  

  jenniferajiang

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Commits on Oct 6, 2023

• Merge branch 'bug-fix/negex-config-and-improve-logging' into dev

  

  jenniferajiang

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  50e4aec

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• Merge branch 'master' of https://github.com/uclh-criu/miade into dev

  

  jenniferajiang

  committed
  cd7b5b8

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Commits on Oct 10, 2023

• ⬆️ MedCAT==1.9.3

  

  jenniferajiang

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• Merge branch 'hotfix/medcat-patch' into dev

  

  jenniferajiang

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  a370269

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• Merge branch 'master' of https://github.com/uclh-criu/miade into dev

  

  jenniferajiang

  committed
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Commits on Oct 30, 2023

• Algorithm tweak to default to adverse reaction in allergy paragraphs (#93)

  jenniferjiangkells

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• 👷 Install pytorch cpu

  

  jenniferajiang

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  8956c18

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• Update lookup data (#94)

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  jenniferjiangkells

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• 🐛 Fixed vtm deduplication bug (#96)

  jenniferjiangkells

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• 👷 Run tests on dev PRs

  

  jenniferajiang

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  8bf1bfb

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• 🐛 Fixed prob list cap bug to return exactly first 10 prob concepts

  

  jenniferajiang

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  ca7dbe0

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• 🔧 Update sample miade config

  

  jenniferajiang

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Commits on Nov 2, 2023

• Revert long problems list filtering and add numbering to problems list (#99)

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  jenniferjiangkells

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Commits on Nov 6, 2023

• Streamlit trainer preprocessing (#97)

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  jenniferjiangkells

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Commits on Nov 14, 2023

• Update problem blacklist

  

  jenniferajiang

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• Merge branch 'update-blacklist' into dev

  

  jenniferajiang

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  656b613

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• Update blacklist

  

  jenniferajiang

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  46e7d86

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• Merge branch 'dev' of https://github.com/uclh-criu/miade into dev

  

  jenniferajiang

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  57e2a97

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• Update blacklist

  

  jenniferajiang

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  69eeb57

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Commits on Nov 15, 2023

• 🗃️ Update problems blacklist v2

  

  jenniferajiang

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  75c8695

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• Merge branch 'master' into release-v0.10.2

  jenniferjiangkells

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