Merge branch 'master' of https://github.com/uclh-criu/miade into dev

uclh-criu · Jan 9, 2024 · 9bb6fda · 9bb6fda
2 parents e074b8f + f5c5f6c
commit 9bb6fda
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Showing 8 changed files with 538 additions and 354 deletions.
diff --git a/configs/miade_config.yaml b/configs/miade_config.yaml
@@ -8,8 +8,11 @@ general:
   problems:
     lookup_data_path: ./lookup_data/
     negation_detection: None
+    structured_list_limit: 0  # if more than this number of concepts in structure section, ignore concepts in prose
     disable: []
+    add_numbering: True
   meds/allergies:
     lookup_data_path: ./lookup_data/
     negation_detection: None
-    disable: []
+    disable: []
+    add_numbering: False
diff --git a/src/miade/annotators.py b/src/miade/annotators.py
diff --git a/src/miade/utils/annotatorconfig.py b/src/miade/utils/annotatorconfig.py
@@ -5,4 +5,6 @@
 class AnnotatorConfig(BaseModel):
     lookup_data_path: Optional[str] = "./lookup_data/"
     negation_detection: Optional[str] = "negex"
+    structured_list_limit: Optional[int] = 100
     disable: List[str] = []
+    add_numbering: bool = False