This repository contains the scripts and data used to generate the concept lists for MiADE's MedCAT models.
The files in each folder may include:
- README.md
- R or python scripts
- Log files
- CSV files containing the data
Each folder in model_files contains the CDB data and lookup tables for a deployment of MiADE.
Folders:
.
├── README.md
├── model_files
│ └── uclh_trial_2023
├── sample_notes
├── scripts
├── synthetic_data
└── vocabularies
└── wikipedia_vocab
- sample_notes - fake clinical notes for testing
- Vocabularies - sets of word embeddings to build medcat models with
- wikipedia_vocab - an open vocabluary which has been trained on a wikipeda dump, and contains no other data.
- model_files - contains directories which contain CDB data and lookup tables for a MiADE deployment
- uclh_trial_2023 - the lookup tables and CDB data for the MiADE version 1 and 2 trial deployments at UCLH.
- scripts - scripts used to generate files in cdb_and_model_files_sep_2023