Skip to content

Commit

Permalink
Update jupyter-book/introduction/raw_data_processing.md
Browse files Browse the repository at this point in the history
Co-authored-by: Lukas Heumos <[email protected]>
  • Loading branch information
seohyonkim and Zethson authored Feb 7, 2025
1 parent 275228c commit 7f5886f
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion jupyter-book/introduction/raw_data_processing.md
Original file line number Diff line number Diff line change
Expand Up @@ -104,7 +104,7 @@ A good (left) and a bad (right) per-read sequence quality graph.
**3. Per tile sequence quality**
Using an Illumina library, the per-tile sequence quality plot highlights deviations from the average quality for reads across each {term}`flowcell` [tile](https://www.biostars.org/p/9461090/)(miniature imaging areas of the {term}`flowcell`).
The plot uses a color gradient to represent deviations, where “hotter” colors indicate larger deviations.
The plot uses a color gradient to represent deviations, where warmer colors indicate larger deviations.
High-quality data typically display a uniform blue color across the plot, indicating consistent quality across all tiles of the flowcell.
If hot colors appear in certain areas, it suggests that only part of the flowcell experienced poor quality.
Expand Down

0 comments on commit 7f5886f

Please sign in to comment.