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Fix ids for flexporter executeScript #1501

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merged 2 commits into from
Sep 5, 2024
Merged

Fix ids for flexporter executeScript #1501

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c44de55
Fix ids for flexporter executeScript
lmd59 Sep 3, 2024
2ab3200
Add null check to pass test
lmd59 Sep 3, 2024
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12 changes: 12 additions & 0 deletions src/main/java/org/mitre/synthea/export/flexporter/Actions.java
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Original file line number Diff line number Diff line change
Expand Up @@ -758,6 +758,18 @@ public static Bundle executeScript(List<Map<String, String>> scripts, Bundle bun
String outBundleJson = fjContext.getBundle();

Bundle newBundle = parser.parseResource(Bundle.class, outBundleJson);
for (BundleEntryComponent bec : newBundle.getEntry()) {
Resource r = bec.getResource();
if (r.getId() != null && r.getId().startsWith("urn:uuid:")) {
// HAPI does some weird stuff with IDs
// by default in Synthea they are just plain UUIDs
// and the entry.fullUrl is urn:uuid:(id)
// but somehow when they get parsed back in, the id is urn:uuid:etc
// which then doesn't get written back out at the end
// so this removes the "urn:uuid:" bit if it got added
r.setId(r.getId().substring(9));
}
}

return newBundle;
}
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