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6.2.2 Phylotyper queries graph directly
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@kevinkle kevinkle released this 30 Apr 21:06
· 177 commits to master since this release
v6.2.2
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CHANGE:

  • Phylotyper no longer queries Blazegraph for results from ECTyper. Instead, the DNASequences are directly retrieved from the graph objects created in the pipeline. This is done because the phylotyper.sequences.sequence_query() was bottlenecking the pipeline.
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