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Description
This PR adjusts mixing pools slightly to make them behave more interchangeably with networks. In particular, we encountered two issues
step()
method, which runs prior to interventions unlike network-based transmission which occurs after interventionsinfect()
method to adjustrel_sus
andrel_trans
prior to transmission, but this method was not used for mixing pool infectionsThese changes shift execution of mixing pool infections into
Infection.infect()
so that they occur in the same place and in a similar way to network based infections.Checklist