Workflow file for this run
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| on: | ||
| workflow_call: | ||
| inputs: | ||
| skip: | ||
| required: false | ||
| type: string | ||
| default: '' | ||
| main_branches: | ||
| required: false | ||
| type: string | ||
| default: 'main,master' | ||
| event_name: | ||
| required: true | ||
| type: string | ||
| run_id: | ||
| required: true | ||
| type: string | ||
| rcmdcheck_args: | ||
| required: false | ||
| type: string | ||
| default: 'c("--no-manual", "--as-cran", "--no-tests")' | ||
| schemas: | ||
| required: false | ||
| type: string | ||
| backend_exclude: | ||
| required: false | ||
| type: string | ||
| check_postgres_logs: | ||
| required: false | ||
| type: boolean | ||
| default: true | ||
| auto_link_r6: | ||
| required: false | ||
| type: boolean | ||
| default: true | ||
| jobs: | ||
| # To give granular control of when workflows should execute, we determine which "categories" of files has changed | ||
| trigger: | ||
| name: ⚙️ Determine downstream workflow triggers | ||
| runs-on: ubuntu-latest | ||
| outputs: | ||
| on_main_branch: ${{ steps.main_branch_affected.outputs.on_main_branch }} | ||
| main_branch_affected: ${{ steps.main_branch_affected.outputs.main_branch_affected }} | ||
| branch_name: ${{ steps.branch_name.outputs.branch_name }} | ||
| cache_version: ${{ steps.cache_version.outputs.cache_version }} | ||
| min_r_version: ${{ steps.min_r_version.outputs.min_R_version }} | ||
| lint: ${{ | ||
| !contains(inputs.skip, 'lint') && | ||
| ( | ||
| inputs.event_name == 'workflow_dispatch' || | ||
| steps.main_branch_affected.outputs.on_main_branch == 'true' || | ||
| ( | ||
| steps.changed-files-yaml.outputs.R_any_changed == 'true' || | ||
| steps.changed-files-yaml.outputs.test_any_changed == 'true' || | ||
| steps.changed-files-yaml.outputs.man_any_changed == 'true' || | ||
| steps.changed-files-yaml.outputs.vignette_any_changed == 'true' || | ||
| steps.changed-files-yaml.outputs.lintr_any_changed == 'true' | ||
| ) | ||
| ) }} | ||
| spell-checker: ${{ | ||
| !contains(inputs.skip, 'spell-checker') && | ||
| ( | ||
| inputs.event_name == 'workflow_dispatch' || | ||
| steps.main_branch_affected.outputs.on_main_branch == 'true' || | ||
| ( | ||
| steps.changed-files-yaml.outputs.description_any_changed == 'true' || | ||
| steps.changed-files-yaml.outputs.man_any_changed == 'true' || | ||
| steps.changed-files-yaml.outputs.vignette_any_changed == 'true' | ||
| ) | ||
| ) }} | ||
| R-CMD-check: ${{ | ||
| !contains(inputs.skip, 'R-CMD-check') && | ||
| ( | ||
| inputs.event_name == 'workflow_dispatch' || | ||
| inputs.event_name == 'release' || | ||
| steps.main_branch_affected.outputs.on_main_branch == 'true' || | ||
| ( | ||
| steps.main_branch_affected.outputs.main_branch_affected == 'true' && | ||
| ( | ||
| steps.changed-files-yaml.outputs.R_any_changed == 'true' || | ||
| steps.changed-files-yaml.outputs.test_any_changed == 'true' || | ||
| steps.changed-files-yaml.outputs.description_any_changed == 'true' || | ||
| steps.changed-files-yaml.outputs.man_any_changed == 'true' || | ||
| steps.changed-files-yaml.outputs.vignette_any_changed == 'true' | ||
| ) | ||
| ) | ||
| ) }} | ||
| code-coverage: ${{ | ||
| !contains(inputs.skip, 'code-coverage') && | ||
| ( | ||
| inputs.event_name == 'workflow_dispatch' || | ||
| inputs.event_name == 'release' || | ||
| steps.main_branch_affected.outputs.on_main_branch == 'true' || | ||
| ( | ||
| steps.main_branch_affected.outputs.main_branch_affected == 'true' && | ||
| ( | ||
| steps.changed-files-yaml.outputs.R_any_changed == 'true' || | ||
| steps.changed-files-yaml.outputs.test_any_changed == 'true' || | ||
| steps.changed-files-yaml.outputs.description_any_changed == 'true' | ||
| ) | ||
| ) | ||
| ) }} | ||
| styler: ${{ | ||
| !contains(inputs.skip, 'styler') && | ||
| ( inputs.event_name == 'workflow_dispatch' || inputs.event_name != 'release' ) | ||
| ) }} | ||
| document: ${{ | ||
| !contains(inputs.skip, 'document') && | ||
| ( | ||
| inputs.event_name == 'workflow_dispatch' || | ||
| ( | ||
| inputs.event_name != 'release' && | ||
| ( | ||
| steps.main_branch_affected.outputs.on_main_branch == 'true' || | ||
| steps.changed-files-yaml.outputs.R_any_changed == 'true' || | ||
| steps.changed-files-yaml.outputs.description_any_changed == 'true' | ||
| ) | ||
| ) | ||
| ) }} | ||
| render-readme: ${{ | ||
| !contains(inputs.skip, 'render-readme') && | ||
| ( | ||
| inputs.event_name == 'workflow_dispatch' || | ||
| ( | ||
| inputs.event_name != 'release' && | ||
| ( | ||
| steps.main_branch_affected.outputs.main_branch_affected == 'true' || | ||
| needs.trigger.outputs.readme_any_changed == 'true' | ||
| ) | ||
| ) | ||
| ) }} | ||
| pkgdown: ${{ | ||
| !contains(inputs.skip, 'pkgdown') && | ||
| ( | ||
| inputs.event_name == 'workflow_dispatch' || | ||
| inputs.event_name == 'release' || | ||
| steps.main_branch_affected.outputs.on_main_branch == 'true' || | ||
| ( | ||
| steps.main_branch_affected.outputs.main_branch_affected == 'true' && | ||
| ( | ||
| steps.changed-files-yaml.outputs.R_any_changed == 'true' || | ||
| steps.changed-files-yaml.outputs.description_any_changed == 'true' || | ||
| steps.changed-files-yaml.outputs.man_any_changed == 'true' || | ||
| steps.changed-files-yaml.outputs.vignette_any_changed == 'true' | ||
| ) | ||
| ) | ||
| ) }} | ||
| update-lockfile: ${{ | ||
| !contains(inputs.skip, 'update-lockfile') && | ||
| ( | ||
| inputs.event_name == 'workflow_dispatch' || | ||
| ( | ||
| inputs.event_name != 'release' && | ||
| ( | ||
| steps.main_branch_affected.outputs.on_main_branch == 'true' || | ||
| ( | ||
| steps.main_branch_affected.outputs.main_branch_affected == 'true' && | ||
| ( | ||
| steps.changed-files-yaml.outputs.R_any_changed == 'true' || | ||
| steps.changed-files-yaml.outputs.test_any_changed == 'true' || | ||
| steps.changed-files-yaml.outputs.description_any_changed == 'true' | ||
| ) | ||
| ) | ||
| ) | ||
| ) | ||
| ) }} | ||
| steps: | ||
| - uses: actions/checkout@v4 | ||
| with: | ||
| fetch-depth: 0 | ||
| - name: Detect changes to R/, tests/, man/, vignettes/, README.Rmd and DESCRIPTION | ||
| id: changed-files-yaml | ||
| uses: tj-actions/changed-files@v41 | ||
| with: | ||
| files_yaml: | | ||
| R: | ||
| - R/** | ||
| - data-raw/** | ||
| test: | ||
| - tests/** | ||
| man: | ||
| - man/** | ||
| vignette: | ||
| - vignettes/** | ||
| readme: | ||
| - README.md | ||
| - README.Rmd | ||
| - .github/templates/README_template.Rmd | ||
| description: | ||
| - DESCRIPTION | ||
| lintr: | ||
| - .lintr* | ||
| - name: Determine branch name | ||
| id: branch_name | ||
| shell: bash | ||
| run: | | ||
| echo "branch_name=${GITHUB_HEAD_REF:-${GITHUB_REF#refs/heads/}}" >> $GITHUB_OUTPUT | ||
| - name: Determine main branch involvement | ||
| id: main_branch_affected | ||
| shell: bash | ||
| run: | | ||
| if [ "${{ inputs.event_name }}" == "pull_request" ] && [[ "${{ inputs.main_branches }}" == *"$GITHUB_BASE_REF"* ]]; then | ||
| # Pull request event to a main branch | ||
| echo "main_branch_affected=true" >> $GITHUB_OUTPUT | ||
| echo "on_main_branch=false" >> $GITHUB_OUTPUT | ||
| elif [ "${{ inputs.event_name }}" != "pull_request" ] && [[ "${{ inputs.main_branches }}" == *"$GITHUB_REF_NAME"* ]]; then | ||
| # Non pull request event to a main branch | ||
| echo "main_branch_affected=true" >> $GITHUB_OUTPUT | ||
| echo "on_main_branch=true" >> $GITHUB_OUTPUT | ||
| else | ||
| # All other cases | ||
| echo "main_branch_affected=false" >> $GITHUB_OUTPUT | ||
| echo "on_main_branch=false" >> $GITHUB_OUTPUT | ||
| fi | ||
| - name: Determine R version requirement in DESCRIPTION | ||
| id: min_r_version | ||
| run: | | ||
| min_R_version=$(awk '/R \(>= / {match($0, /R \(>= ([0-9]+\.[0-9]+(\.[0-9]+)?)/, arr); print arr[1]}' DESCRIPTION) | ||
| echo "min_R_version=${min_R_version}" >> $GITHUB_OUTPUT | ||
| - name: Invalidate cache on workflow_dispatch | ||
| id: cache_version | ||
| shell: bash | ||
| run: | | ||
| if [ "${{ inputs.event_name }}" == "workflow_dispatch" ] ; then | ||
| echo "cache_version=0" >> $GITHUB_OUTPUT | ||
| else | ||
| echo "cache_version=1" >> $GITHUB_OUTPUT | ||
| fi | ||
| - name: Report triggers | ||
| run: | | ||
| echo "R/ directory changes: ${{ steps.changed-files-yaml.outputs.R_any_changed }}" | ||
| echo "tests/ directory changes: ${{ steps.changed-files-yaml.outputs.test_any_changed }}" | ||
| echo "man/ directory changes: ${{ steps.changed-files-yaml.outputs.man_any_changed }}" | ||
| echo "vignettes/ directory changes: ${{ steps.changed-files-yaml.outputs.vignette_any_changed }}" | ||
| echo "README.Rmd changed: ${{ steps.changed-files-yaml.outputs.readme_any_changed }}" | ||
| echo "DESCRIPTION changed: ${{ steps.changed-files-yaml.outputs.description_any_changed }}" | ||
| echo "lintr files changed: ${{ steps.changed-files-yaml.outputs.lintr_any_changed }}" | ||
| echo "main branch affected: ${{ steps.main_branch_affected.outputs.main_branch_affected }}" | ||
| echo "branch name: ${{ steps.branch_name.outputs.branch_name }}" | ||
| echo "cache_version: ${{ steps.cache_version.outputs.cache_version }}" | ||
| echo "R version requirement: ${{ steps.min_r_version.outputs.min_R_version }}" | ||
| inspect-trigger-output: | ||
| needs: trigger | ||
| name: 🐞 Inspect trigger output | ||
| runs-on: ubuntu-latest | ||
| steps: | ||
| - run: | | ||
| echo "main_branch_affected: ${{ needs.trigger.outputs.main_branch_affected }}" | ||
| echo "branch_name: ${{ needs.trigger.outputs.branch_name }}" | ||
| echo "cache_version: ${{ needs.trigger.outputs.cache_version }}" | ||
| echo "min_r_version: ${{ needs.trigger.outputs.min_r_version }}" | ||
| echo "lint: ${{ needs.trigger.outputs.lint }}" | ||
| echo "spell-checker: ${{ needs.trigger.outputs.spell-checker }}" | ||
| echo "R-CMD-check: ${{ needs.trigger.outputs.R-CMD-check }}" | ||
| echo "code-coverage: ${{ needs.trigger.outputs.code-coverage }}" | ||
| echo "styler: ${{ needs.trigger.outputs.styler }}" | ||
| echo "document: ${{ needs.trigger.outputs.document }}" | ||
| echo "render-readme: ${{ needs.trigger.outputs.render-readme }}" | ||
| echo "pkgdown: ${{ needs.trigger.outputs.pkgdown }}" | ||
| echo "update-lockfile: ${{ needs.trigger.outputs.update-lockfile }}" | ||
| update-lockfile: | ||
| needs: trigger | ||
| uses: ./.github/workflows/update-lockfile.yaml | ||
| if: ${{ needs.trigger.outputs.update-lockfile == 'true' }} | ||
| with: | ||
| cache_version: ${{ needs.trigger.outputs.cache_version }} | ||
| branch_name: ${{ needs.trigger.outputs.branch_name }} | ||
| secrets: inherit | ||
| concurrency: | ||
| group: update-lockfile-${{ needs.trigger.outputs.branch_name }} | ||
| cancel-in-progress: true | ||
| document-render-readme-styler: | ||
| needs: [trigger, update-lockfile] | ||
| uses: ./.github/workflows/document-render-readme-styler.yaml | ||
| if: ${{ always() && !failure() && !cancelled() }} | ||
| with: | ||
| branch_name: ${{ needs.trigger.outputs.branch_name }} | ||
| cache_version: ${{ needs.trigger.outputs.cache_version }} | ||
| styler: ${{ needs.trigger.outputs.styler == 'true' }} | ||
| document: ${{ needs.trigger.outputs.document == 'true' }} | ||
| render_readme: ${{ needs.trigger.outputs.render-readme == 'true' }} | ||
| secrets: inherit | ||
| concurrency: | ||
| group: document-render-readme-styler-${{ needs.trigger.outputs.branch_name }} | ||
| cancel-in-progress: true | ||
| lint: | ||
| needs: [trigger, update-lockfile, document, render-readme] | ||
| if: ${{ always() && !failure() && !cancelled() && needs.trigger.outputs.lint == 'true' }} | ||
| uses: ./.github/workflows/lint.yaml | ||
| with: | ||
| cache_version: ${{ needs.trigger.outputs.cache_version }} | ||
| spell-checker: | ||
| needs: [trigger, update-lockfile, document, render-readme] | ||
| if: ${{ always() && !failure() && !cancelled() && needs.trigger.outputs.spell-checker == 'true' }} | ||
| uses: ./.github/workflows/spell-checker.yaml | ||
| secrets: inherit | ||
| R-CMD-check: | ||
| needs: [trigger, update-lockfile, document, render-readme] | ||
| if: ${{ always() && !failure() && !cancelled() && needs.trigger.outputs.R-CMD-check == 'true' }} | ||
| uses: ./.github/workflows/R-CMD-check.yaml | ||
| with: | ||
| rcmdcheck_args: ${{ inputs.rcmdcheck_args }} | ||
| cache_version: ${{ needs.trigger.outputs.cache_version }} | ||
| min_r_version: ${{ needs.trigger.outputs.min_r_version }} | ||
| secrets: inherit | ||
| concurrency: | ||
| group: R-CMD-check-${{ needs.trigger.outputs.branch_name }} | ||
| cancel-in-progress: true | ||
| code-coverage: | ||
| needs: [trigger, update-lockfile, document, render-readme] | ||
| if: ${{ always() && !failure() && !cancelled() && needs.trigger.outputs.code-coverage == 'true' }} | ||
| uses: ./.github/workflows/code-coverage.yaml | ||
| with: | ||
| cache_version: ${{ needs.trigger.outputs.cache_version }} | ||
| schemas: ${{ inputs.schemas }} | ||
| backend_exclude: ${{ inputs.backend_exclude }} | ||
| check_postgres_logs: ${{ inputs.check_postgres_logs }} | ||
| secrets: inherit | ||
| concurrency: | ||
| group: code-coverage-${{ needs.trigger.outputs.branch_name }} | ||
| cancel-in-progress: true | ||
| pkgdown: | ||
| needs: [trigger, update-lockfile, document, render-readme] | ||
| if: ${{ always() && !failure() && !cancelled() && needs.trigger.outputs.pkgdown == 'true' }} | ||
| uses: ./.github/workflows/pkgdown.yaml | ||
| with: | ||
| auto_link_r6: ${{ inputs.auto_link_r6 }} | ||
| event_name: ${{ inputs.event_name }} | ||
| main_branches: ${{ inputs.main_branches }} | ||
| run_id: ${{ inputs.run_id }} | ||
| cache_version: ${{ needs.trigger.outputs.cache_version }} | ||
| secrets: inherit | ||
| concurrency: | ||
| group: pkgdown-${{ needs.trigger.outputs.branch_name }}${{ github.event_name == 'release' && '-release' || '' }} | ||
| cancel-in-progress: true | ||
