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Fixes seqfish reader v2 #268

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Fixes seqfish reader v2 #268

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LucaMarconato
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@LucaMarconato LucaMarconato commented Jan 28, 2025 •
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Additional fixes to support the seqFISH v2 file format.

Changelog

  • improved parsing of OME XML metadata
  • automatically parsing images as multiscale when they are larger than a threshold
  • allowing arbitrary strings as ROIs prefixes
  • now representing different ROIs in different coordinate systems
  • parsing z coordinate for points
  • fixed bug with indices of shapes when multiple rois were considered

CC @LLehner @adamdingliang

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