Added redacted data

.gitignore

@@ -3,3 +3,4 @@ outputs/
 .Rproj.user
 .Rhistory
 .RData
+Rplots.pdf

README.md

@@ -10,7 +10,7 @@ Exploring the indirect effects the COVID-19 public health emergency on the repor
 2. Run `node main.js` to create the SQL queries necessary for data extraction
 3. When on the server execute `data-extraction/RunToExtractData.bat` to extract the data
 4. Data with daily counts ends up in a directory outside of this repo due to small numbers
-5. 
+5. Analysis instructions are below
 
 ## Analysis
 
@@ -28,15 +28,4 @@ Navigate to the root of the project and execute:
 npm run analyse
 ```
 
-All outputs appear in the `./outputs` directory.
-
-## Proposals
-
-***This has been superseded - I think...***
-
-1. Has there been any change in new diagnoses for these conditions of interest? Ideally, calculating incidence rates per month.
-2. For those with existing mental illness disorders, is there any change in the frequency and type of consultation for those people? In other words, are they consulting less often under the current situation or are they just consulting differently (switch from face-to-face to video/telephone consultation, etc).
-  - does this vary per condition
-  - is it larger/smaller when compared with physical health conditions
-  - need a shortlist of such physical health conditions - preferably those not related to mental health
-3. We have a lot of speculative codes for these conditions - many of which relate to symptoms. Could we examine whether the current situation has exacerbated symptoms (or increased the frequency of episodes) among patients with prior diagnoses?
+All outputs appear in the `./outputs` directory. Redacted monthly data will be written to the `./data-extraction/data` directory. Any counts `<10` are replaced with `0`s.

data-extraction/data/.gitignore

@@ -3,4 +3,4 @@
 
 # But not these file...
 !.gitignore
-dx*txt
+!dx*txt

data-extraction/data/dx--acei.txt

@@ -0,0 +1,126 @@
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