version 0.1.1

• improved detection of installation directory & Rfam indices

• instead of fractions, percantages are used in read statistics

• several minor improvements to the MRD output format

• negative repeat count warnings have been removed

• HTML output does not contain (now dead) links to (old) Rajewsky lab webpage
  anymore

• install.pl now modifies ~/.bashrc rather than ~/.bash_profile

• miRDeep2.pl now handles changed RNAfold output