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added initial end to end tests
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@mattheww95
mattheww95 committed Dec 4, 2024
1 parent 6a96487 commit aa14d20
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Showing 22 changed files with 234 additions and 0 deletions.
Empty file added tests/data/__init__.py
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6 changes: 6 additions & 0 deletions tests/data/data.tsv
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1 change: 1 addition & 0 deletions tests/data/hamming/allele_map.json
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{}
6 changes: 6 additions & 0 deletions tests/data/hamming/query_profile.text
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Sample A1 A2 A3 A4
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6 changes: 6 additions & 0 deletions tests/data/hamming/ref_profile.text
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Sample A1 A2 A3 A4
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6 changes: 6 additions & 0 deletions tests/data/hamming/results.text
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38 changes: 38 additions & 0 deletions tests/data/hamming/run.json
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1 change: 1 addition & 0 deletions tests/data/hamming_count_missing/allele_map.json
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{}
6 changes: 6 additions & 0 deletions tests/data/hamming_count_missing/query_profile.text
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Sample A1 A2 A3 A4
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6 changes: 6 additions & 0 deletions tests/data/hamming_count_missing/ref_profile.text
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Sample A1 A2 A3 A4
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6 changes: 6 additions & 0 deletions tests/data/hamming_count_missing/results.text
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38 changes: 38 additions & 0 deletions tests/data/hamming_count_missing/run.json
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1 change: 1 addition & 0 deletions tests/data/scaled/allele_map.json
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6 changes: 6 additions & 0 deletions tests/data/scaled/query_profile.text
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Sample A1 A2 A3 A4
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6 changes: 6 additions & 0 deletions tests/data/scaled/ref_profile.text
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Sample A1 A2 A3 A4
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6 changes: 6 additions & 0 deletions tests/data/scaled/results.text
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38 changes: 38 additions & 0 deletions tests/data/scaled/run.json
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1 change: 1 addition & 0 deletions tests/data/scaled_count_missing/allele_map.json
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{}
6 changes: 6 additions & 0 deletions tests/data/scaled_count_missing/query_profile.text
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@@ -0,0 +1,6 @@
Sample A1 A2 A3 A4
r1 1 1 1 0
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r3 1 1 1 0
r4 1 1 1 0
r5 2 2 2 0
6 changes: 6 additions & 0 deletions tests/data/scaled_count_missing/ref_profile.text
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Sample A1 A2 A3 A4
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r3 1 1 1 0
r4 1 1 1 0
r5 2 2 2 0
6 changes: 6 additions & 0 deletions tests/data/scaled_count_missing/results.text
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38 changes: 38 additions & 0 deletions tests/data/scaled_count_missing/run.json
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{
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}

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