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Clarify jobfs docs #551

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Clarify jobfs docs #551

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12 changes: 7 additions & 5 deletions docs/source/config.rst
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Original file line number Diff line number Diff line change
Expand Up @@ -98,8 +98,10 @@ These settings are primarily used by the PBS scheduler.
setting is applied to any ``qsub`` calls.

``jobfs``
Request a non-default amount of storage that is local to the compute.
See `NCI jobfs documentation`_ and the `CLEX blog for details`_.
The maximum amount of local disk available to the job on the hosting compute nodes.
If this is missing in the submission, the value is set to 100 MiB.
The `jobfs` allocation in a multiple-node jobs will be distributed equally among every nodes.
See `NCI jobfs documentation`_ and the `CLEX blog`_ for details.

``storage``
On the NCI system gadi all storage mount points must be specified, except
Expand All @@ -118,8 +120,8 @@ These settings are primarily used by the PBS scheduler.
scratch:
- zz3

.. _`NCI jobfs documentation`: https://opus.nci.org.au/display/Help/PBS+Directives+Explained#PBSDirectivesExplained--ljobfs=%3C10GB%3E
.. _`CLEX blog for details`: https://climate-cms.org/posts/2022-11-10-jobfs.html#what-is-pbs-jobfs
.. _`NCI jobfs documentation`: https://opus.nci.org.au/spaces/Help/pages/236881349/PBS+Directives...#PBSDirectives...--ljobfs=%3C10GB%3E
.. _`CLEX blog`: https://coecms.github.io/posts/2022-11-10-jobfs.html

Model
-----
Expand Down Expand Up @@ -600,4 +602,4 @@ Miscellaneous
is an earlier version, and if so, payu will refuse to run.
This is useful for models that require features that are in later versions
of payu.
Note that this check will only run with payu versions later than `1.1.5`.
Note that this check will only run with payu versions later than `1.1.5`.
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