update pybind11 in odgi · pangenome/smoothxg@4c26908

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update pybind11 in odgi

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subwaystation committed Mar 19, 2024

1 parent 52a81b7 commit 4c26908

+1 −1		.github/workflows/build_and_test_on_push.yml
+1 −1		.github/workflows/publish_docker_hub.yml
+4 −1		.gitignore
+35 −0		.readthedocs.yaml
+1 −1		deps/pybind11
+3 −3		docs/conf.py
+ −		docs/img/DRB1-3123_sorted.U1000.png
+ −		docs/img/DRB1-3123_sorted.j10000.png
+ −		docs/img/DRB1-3123_sorted.x2.png
+ −		docs/img/DRB1-3123_sorting_layouting.png
+1 −1		docs/index.rst
+1 −0		docs/requirements.txt
+2 −3		docs/rst/commands/odgi_sort.rst
+3 −3		docs/rst/multiqc.rst
+3 −3		docs/rst/quick_start.rst
+1 −1		docs/rst/tutorials/exploratory_analysis.rst
+108 −4		docs/rst/tutorials/sort_layout.rst
+15 −1		src/algorithms/atomic_image.cpp
+2 −0		src/algorithms/atomic_image.hpp
+182 −11		src/algorithms/draw.cpp
+4 −1		src/algorithms/draw.hpp
+9 −0		src/position.hpp
+27 −11		src/subcommand/draw_main.cpp
+11 −0		src/subcommand/extract_main.cpp
+16 −0		src/subcommand/paths_main.cpp