ENH: removed median percentile to be always included in describe GH #60550

doc/source/whatsnew/v2.3.0.rst

@@ -36,7 +36,6 @@ Other enhancements
   when using ``np.array()`` or ``np.asarray()`` on pandas objects) has been
   updated to work correctly with NumPy >= 2 (:issue:`57739`)
 - The :meth:`~Series.sum` reduction is now implemented for ``StringDtype`` columns (:issue:`59853`)
--
 
 .. ---------------------------------------------------------------------------
 .. _whatsnew_230.notable_bug_fixes:

doc/source/whatsnew/v3.0.0.rst

@@ -65,6 +65,7 @@ Other enhancements
 - Support passing a :class:`Iterable[Hashable]` input to :meth:`DataFrame.drop_duplicates` (:issue:`59237`)
 - Support reading Stata 102-format (Stata 1) dta files (:issue:`58978`)
 - Support reading Stata 110-format (Stata 7) dta files (:issue:`47176`)
+- Fixed bug where median percentile is included in :meth:`~Series.describe` when a blank list is passed (:issue:`60550`).
 
 .. ---------------------------------------------------------------------------
 .. _whatsnew_300.notable_bug_fixes:

pandas/core/methods/describe.py

@@ -351,13 +351,13 @@ def _refine_percentiles(
     # explicit conversion of `percentiles` to list
     percentiles = list(percentiles)
 
+    # percentiles are removed if an user explictly pass blank list
+    if len(percentiles) == 0:
+        return np.array([])
+
     # get them all to be in [0, 1]
     validate_percentile(percentiles)
 
-    # median should always be included
-    if 0.5 not in percentiles:
-        percentiles.append(0.5)
-
     percentiles = np.asarray(percentiles)
 
     # sort and check for duplicates

pandas/tests/frame/methods/test_describe.py

@@ -413,3 +413,34 @@ def test_describe_exclude_pa_dtype(self):
             dtype=pd.ArrowDtype(pa.float64()),
         )
         tm.assert_frame_equal(result, expected)
+
+    def test_refine_percentiles(self):
+        # GH#60550
+        df = DataFrame({"a" : np.arange(0, 10, 1)})
+
+        # the default behavior is to return [0.25, 0.5, 0.75]
+        result = df.describe()
+        expected = DataFrame(
+            {"a" : [10, df.a.mean(), df.a.std(), 0, 2.25, 4.5, 6.75, 9]},
+            index=["count", "mean", "std", "min", "25%", "50%", "75%", "max"]
+        )
+
+        tm.assert_frame_equal(result, expected)
+
+        # no percentiles if an user explictly pass blank list
+        result = df.describe(percentiles=[])
+        expected = DataFrame(
+            {"a" : [10, df.a.mean(), df.a.std(), 0, 9]},
+            index=["count", "mean", "std", "min", "max"]
+        )
+
+        tm.assert_frame_equal(result, expected)
+
+        # if a list is passed, it should return with the same values
+        result = df.describe(percentiles=[0.2])
+        expected = DataFrame(
+            {"a" : [10, df.a.mean(), df.a.std(), 0, 1.8, 9]},
+            index=["count", "mean", "std", "min", "20%", "max"]
+        )
+
+        tm.assert_frame_equal(result, expected)