Skip to content

@sysbiolab Bioinformatics and Systems Biology Laboratory

Change the repository type filter

All

    Repositories list

    7 repositories

    • neuriteScan

      Public
      An R Package for neurite image analysis.
      HTML
      •1•1•0•0•Updated Feb 6, 2025Feb 6, 2025

    • PathwaySpace

      Public
      PathwaySpace is an R package that creates landscape images from graphs containing vertices (nodes), edges (lines), and a signal associated with the vertices.
      bioinformaticsrgraphbiological-networks
      R
      •1•2•0•0•Updated Jan 12, 2025Jan 12, 2025

    • RGraphSpace

      Public
      A lightweight package for representing large igraph objects in a normalized coordinate system
      R
      •0•1•0•0•Updated Nov 12, 2024Nov 12, 2024

    • alphafold

      Public
      Open source code for AlphaFold.
      Python
      •
      Apache License 2.0
      •2.3k•0•0•0•Updated Jun 27, 2024Jun 27, 2024

    • GeneBridge

      Public
      Rooting Orthologous Genes in Large-Scale Evolutionary Analysis.
      R
      •2•7•1•0•Updated Jan 21, 2024Jan 21, 2024

    • TreeAndLeaf

      Public
      An R package for displaying binary trees, aiming to represent multiple layers of information on dendrogram leaves.
      binary-treer-packagebinary-tree-visualizationdendrogramreorganizing-dendrograms
      R
      •3•11•1•0•Updated Oct 21, 2021Oct 21, 2021

    • RTN_example_TCGA_LIHC

      Public
      Example of data preprocessing for RTNsurvival, using the TCGA-LIHC cohort
      R
      •5•0•0•0•Updated Jan 28, 2019Jan 28, 2019