Initial Commit

.devcontainer/devcontainer.json

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+// For format details, see https://aka.ms/devcontainer.json. For config options, see the README at:
+// https://github.com/microsoft/vscode-dev-containers/tree/v0.187.0/containers/docker-existing-dockerfile
+{
+	"name": "Anomalib Development Environment",
+	// Sets the run context to one level up instead of the .devcontainer folder.
+	"context": "..",
+	// Update the 'dockerFile' property if you aren't using the standard 'Dockerfile' filename.
+	"dockerFile": "../Dockerfile",
+	// Set *default* container specific settings.json values on container create.
+	"settings": {
+		"python.pythonPath": "/opt/conda/bin/python",
+		"python.formatting.provider": "black",
+		"editor.formatOnSave": true,
+		"python.formatting.blackArgs": [
+			"--line-length",
+			"120"
+		],
+		"editor.codeActionsOnSave": {
+			"source.organizeImports": true
+		},
+		"python.linting.enabled": true,
+		"python.linting.flake8Enabled": true,
+		"python.linting.flake8Args": [
+			"--max-line-length=120"
+		],
+		"python.testing.cwd": ".",
+		"python.linting.lintOnSave": true,
+		"python.testing.unittestEnabled": false,
+		"python.testing.nosetestsEnabled": false,
+		"python.testing.pytestEnabled": true,
+		"python.testing.pytestArgs": [
+			"tests"
+		]
+	},
+	// Add the IDs of extensions you want installed when the container is created.
+	"extensions": [
+		"ms-python.python",
+		"njpwerner.autodocstring",
+		"streetsidesoftware.code-spell-checker",
+		"eamodio.gitlens",
+		"littlefoxteam.vscode-python-test-adapter"
+	],
+	// Use 'forwardPorts' to make a list of ports inside the container available locally.
+	// "forwardPorts": [],
+	// Uncomment the next line to run commands after the container is created - for example installing curl.
+	// "postCreateCommand": "apt-get update && apt-get install -y curl",
+	// Uncomment when using a ptrace-based debugger like C++, Go, and Rust
+	"runArgs": [
+		"--gpus=all",
+		"--shm-size=20g"
+	]
+	// Uncomment to use the Docker CLI from inside the container. See https://aka.ms/vscode-remote/samples/docker-from-docker.
+	// "mounts": [ "source=/var/run/docker.sock,target=/var/run/docker.sock,type=bind" ],
+	// Uncomment to connect as a non-root user if you've added one. See https://aka.ms/vscode-remote/containers/non-root.
+	// "remoteUser": "vscode"
+}

.dockerignore

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+*.dot
+.idea
+.pytest_cache
+.tox
+.vscode
+__pycache__
+{toxworkdir}
+datasets/
+embeddings/
+lightning_logs/
+lightning_test/
+papers/
+results/

.gitattributes

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+# Makes line endings consistent when using docker on windows
+* text=auto eol=lf
+*.{cmd,[cC][mM][dD]} text eol=crlf
+*.{bat,[bB][aA][tT]} text eol=crlf

.github/workflows/docs.yml

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+name: Build Docs
+
+on:
+  push:
+    branches: [development]
+    paths-ignore:
+      - ".github/**" # Ignore changes towards the .github directory
+
+jobs:
+  Build-and-Publish-Documentation:
+    runs-on: [self-hosted, linux, x64]
+    steps:
+      - name: CHECKOUT REPOSITORY
+        uses: actions/checkout@v2
+      - name: Install requirements
+        run: |
+          pip install -r requirements/requirements.txt
+          pip install -r requirements/requirements_dev.txt
+          pip install -r requirements/requirements_openvino_mo.txt
+      - name: Build and Commit Docs
+        run: |
+          cd docs
+          pip install -r requirements.txt
+          make html
+      - name: Create gh-pages branch
+        run: |
+          echo ::set-output name=SOURCE_NAME::${GITHUB_REF#refs/*/}
+          echo ::set-output name=SOURCE_BRANCH::${GITHUB_REF#refs/heads/}
+          echo ::set-output name=SOURCE_TAG::${GITHUB_REF#refs/tags/}
+
+          existed_in_remote=$(git ls-remote --heads origin gh-pages)
+
+          if [[ -z ${existed_in_remote} ]]; then
+            echo "Creating gh-pages branch"
+            git config --local user.email "[email protected]"
+            git config --local user.name "GitHub Action"
+            git checkout --orphan gh-pages
+            git reset --hard
+            touch .nojekyll
+            git add .nojekyll
+            git commit -m "Initializing gh-pages branch"
+            git push origin gh-pages
+            git checkout ${{steps.branch_name.outputs.SOURCE_NAME}}
+            echo "Created gh-pages branch"
+          else
+            echo "Branch gh-pages already exists"
+          fi
+      - name: Push docs to gh-pages branch
+        run: |
+          git checkout gh-pages
+          cp -r docs/build/html/* ./
+          git config --local user.email "[email protected]"
+          git config --local user.name "GitHub Action"
+          git add .
+          git commit -m "Update documentation" -a || true
+          git push origin gh-pages

.github/workflows/tox.yml

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+name: Pre-merge Checks
+
+on:
+  push:
+    branches: [development, master]
+  pull_request:
+
+jobs:
+  Tox:
+    runs-on: [self-hosted, linux, x64]
+    steps:
+      - name: Print GPU status
+        run: nvidia-smi
+      - name: Print PATH
+        run: echo $PATH
+      - name: CHECKOUT REPOSITORY
+        uses: actions/checkout@v2
+      - name: Install Tox
+        run: pip install tox
+      - name: Code quality checks
+        run: tox -e black,isort,flake8,pylint,mypy
+      - name: Coverage
+        run: tox -e coverage
+      - name: Upload coverage result
+        uses: actions/upload-artifact@v2
+        with:
+          name: coverage
+          path: .tox/coverage.xml

.gitignore

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+# Project related
+datasets
+!anomalib/datasets
+!tests/datasets
+results
+!anomalib/core/results
+
+backup.py
+train.ipynb
+
+# VENV
+.python-version
+.anomalib
+.toxbase
+
+# IDE
+.vscode
+.idea
+
+# Byte-compiled / optimized / DLL files
+__pycache__/
+*.py[cod]
+*$py.class
+
+# C extensions
+*.so
+
+# Distribution / packaging
+.Python
+build/
+develop-eggs/
+dist/
+downloads/
+eggs/
+.eggs/
+lib/
+lib64/
+parts/
+sdist/
+var/
+wheels/
+share/python-wheels/
+*.egg-info/
+.installed.cfg
+*.egg
+MANIFEST
+
+# PyInstaller
+#  Usually these files are written by a python script from a template
+#  before PyInstaller builds the exe, so as to inject date/other infos into it.
+*.manifest
+*.spec
+
+# Installer logs
+pip-log.txt
+pip-delete-this-directory.txt
+
+# Unit test / coverage reports
+htmlcov/
+.tox/
+.nox/
+.coverage
+.coverage.*
+.cache
+nosetests.xml
+coverage.xml
+*.cover
+*.py,cover
+.hypothesis/
+.pytest_cache/
+cover/
+
+# Translations
+*.mo
+*.pot
+
+# Django stuff:
+*.log
+local_settings.py
+db.sqlite3
+db.sqlite3-journal
+
+# Flask stuff:
+instance/
+.webassets-cache
+
+# Scrapy stuff:
+.scrapy
+
+# Sphinx documentation
+docs/_build/
+
+# PyBuilder
+.pybuilder/
+target/
+
+# Jupyter Notebook
+.ipynb_checkpoints
+
+# IPython
+profile_default/
+ipython_config.py
+
+# pyenv
+#   For a library or package, you might want to ignore these files since the code is
+#   intended to run in multiple environments; otherwise, check them in:
+# .python-version
+
+# pipenv
+#   According to pypa/pipenv#598, it is recommended to include Pipfile.lock in version control.
+#   However, in case of collaboration, if having platform-specific dependencies or dependencies
+#   having no cross-platform support, pipenv may install dependencies that don't work, or not
+#   install all needed dependencies.
+#Pipfile.lock
+
+# PEP 582; used by e.g. github.com/David-OConnor/pyflow
+__pypackages__/
+
+# Celery stuff
+celerybeat-schedule
+celerybeat.pid
+
+# SageMath parsed files
+*.sage.py
+
+# Environments
+.env
+.venv
+env/
+venv/
+ENV/
+env.bak/
+venv.bak/
+
+# Spyder project settings
+.spyderproject
+.spyproject
+
+# Rope project settings
+.ropeproject
+
+# mkdocs documentation
+/site
+
+# mypy
+.mypy_cache/
+.dmypy.json
+dmypy.json
+
+# Pyre type checker
+.pyre/
+
+# pytype static type analyzer
+.pytype/
+
+# Cython debug symbols
+cython_debug/
+
+
+# Documentations
+docs/source/generated
+docs/source/api
+docs/source/models
+
+# Misc
+.DS_Store

.pre-commit-config.yaml

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+repos:
+  - repo: https://github.com/pre-commit/pre-commit-hooks
+    rev: v3.4.0
+    hooks:
+      # list of supported hooks: https://pre-commit.com/hooks.html
+      - id: trailing-whitespace
+      - id: end-of-file-fixer
+      - id: check-yaml
+      - id: check-added-large-files
+      - id: debug-statements
+      - id: detect-private-key
+
+  # python code formatting
+  - repo: https://github.com/psf/black
+    rev: 20.8b1
+    hooks:
+      - id: black
+        args: [--line-length, "120"]
+
+  # python import sorting
+  - repo: https://github.com/PyCQA/isort
+    rev: 5.8.0
+    hooks:
+      - id: isort
+        args: ["--profile", "black"]
+
+  # yaml formatting
+  - repo: https://github.com/pre-commit/mirrors-prettier
+    rev: v2.3.0
+    hooks:
+      - id: prettier
+        types: [yaml]
+
+  # python code analysis
+  - repo: https://github.com/PyCQA/flake8
+    rev: 3.9.2
+    hooks:
+      - id: flake8
+        args: [--config=tox.ini]
+        exclude: "tests/"
+
+  # python linting
+  - repo: local
+    hooks:
+      - id: pylint
+        name: pylint
+        entry: pylint --score=no --rcfile=tox.ini
+        language: system
+        types: [python]
+        exclude: "tests|docs"
+
+  # python static type checking
+  - repo: https://github.com/pre-commit/mirrors-mypy
+    rev: "v0.910"
+    hooks:
+      - id: mypy
+        args: [--config-file=tox.ini]
+        additional_dependencies: [types-PyYAML]
+        exclude: "tests/"