editing the ymal file

opensafely · Jan 23, 2025 · 3ddcf05 · 3ddcf05
1 parent 6557fb8
commit 3ddcf05
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Showing 2 changed files with 8 additions and 1 deletion.
diff --git a/analysis/calculate_time_diff_from_dx_to_med.py b/analysis/calculate_time_diff_from_dx_to_med.py
@@ -14,4 +14,4 @@
 
 output = adhd_data['times_between_dia_med_weeks'].value_counts(bins = week_bin)
 
-print(output)
+output.to_csv('output/adhd_dia_med_gap_weeks.csv')
diff --git a/project.yaml b/project.yaml
@@ -12,6 +12,13 @@ actions:
     outputs:
       highly_sensitive:
         adhd_dataset: output/adhd_dataset.csv.gz
+
+  generate_output_table:
+    run: python:v2 python analysis/dataset_definition_dx_to_med_time.py
+    needs: [generate_dataset]
+    outputs:
+      moderately_sensitive:
+        table1: output/adhd_dia_med_gap_weeks.csv
 
   generate_adhd_prevalence:
     run: >
Original file line number	Diff line number	Diff line change
Expand Up		@@ -14,4 +14,4 @@

		output = adhd_data['times_between_dia_med_weeks'].value_counts(bins = week_bin)

		print(output)
		output.to_csv('output/adhd_dia_med_gap_weeks.csv')