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pom: Fix python version #899

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Triggered via push May 8, 2024 11:59

release-2.12.4.x

Status Failure

Total duration 1h 53m 11s

Artifacts 1

develop.yml

on: push

build / Build Java app

test / Execute Sonar Analysis

test / Execute JUnit and Jacoco tests

deploy-docker / Push Docker image

deploy-maven / Deploy to Maven and GitHub Packages

Annotations

51 errors and 2 warnings

ClinicalInterpretationAnalysisTest.: opencga-analysis/src/test/java/org/opencb/opencga/analysis/clinical/ClinicalInterpretationAnalysisTest.java#L79

Error computing pedigree graph for family family

ExomiserInterpretationAnalysisTest.: opencga-analysis/src/test/java/org/opencb/opencga/analysis/clinical/exomiser/ExomiserInterpretationAnalysisTest.java#L58

Error computing pedigree graph for family family

VariantCatalogQueryUtilsTest.: opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantCatalogQueryUtilsTest.java#L138

Error computing pedigree graph for family f1

ClinicalAnalysisManagerTest.deleteClinicalAnalysisWithEmptyInterpretations: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L2666

Error computing pedigree graph for family family

ClinicalAnalysisManagerTest.createClinicalAnalysisWithPanels: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L2864

Error computing pedigree graph for family family

ClinicalAnalysisManagerTest.searchClinicalAnalysisByProband: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L2598

Error computing pedigree graph for family family

ClinicalAnalysisManagerTest.updatePrimarySecondaryLockedInterpretationTest: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L2390

Error computing pedigree graph for family family

ClinicalAnalysisManagerTest.updateCustomConsentTest: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L1764

Error computing pedigree graph for family family

ClinicalAnalysisManagerTest.createAndTestStatusIdIsNotNull: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L230

Error computing pedigree graph for family family

ClinicalAnalysisManagerTest.updateInterpretationFindingsTest: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L1949

Error computing pedigree graph for family family

ClinicalAnalysisManagerTest.deleteLockedClinicalAnalysis: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L2761

Error computing pedigree graph for family family

ClinicalAnalysisManagerTest.searchInterpretationVersion: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L2067

Error computing pedigree graph for family family

ClinicalAnalysisManagerTest.createClinicalAnalysisTest: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L1580

Error computing pedigree graph for family family

ClinicalAnalysisManagerTest.assignPermissions: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L1489

Error computing pedigree graph for family family

ClinicalAnalysisManagerTest.updateCustomPriorityTest: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L1654

Error computing pedigree graph for family family

ClinicalAnalysisManagerTest.testSearchAnnotation: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L3937

Error computing pedigree graph for family family

ClinicalAnalysisManagerTest.updateClinicalAnalysisResponsible: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L381

Error computing pedigree graph for family family

ClinicalAnalysisManagerTest.updateClinicalAnalysisTest: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L1611

Error computing pedigree graph for family family

ClinicalAnalysisManagerTest.updateInterpretationTest: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L2202

Error computing pedigree graph for family family

ClinicalAnalysisManagerTest.sampleNotFoundInMember: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L3052

Error computing pedigree graph for family family

ClinicalAnalysisManagerTest.deleteClinicalAnalysisWithInterpretations: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L2701

Error computing pedigree graph for family family

ClinicalAnalysisManagerTest.searchByInternalAnnotationSetTest: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L3850

Error computing pedigree graph for family family

ClinicalAnalysisManagerTest.updateClinicalAnalystsTest: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L292

Error computing pedigree graph for family family

ClinicalAnalysisManagerTest.checkMoreThanOneSample: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L3082

Error computing pedigree graph for family family

ClinicalAnalysisManagerTest.searchByDisorderTest: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L2785

Error computing pedigree graph for family family

ClinicalAnalysisManagerTest.updateClinicalAnalysisReport: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L407

Error computing pedigree graph for family family

ClinicalAnalysisManagerTest.clearSecondaryInterpretation: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L1910

Error computing pedigree graph for family family

ClinicalAnalysisManagerTest.queryClinicalAnalysisByDate: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L715

Error computing pedigree graph for family family

ClinicalAnalysisManagerTest.deleteClinicalAnalysisTest: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L2649

Error computing pedigree graph for family family

ClinicalAnalysisManagerTest.updateClinicalAnalysisReportWithActions: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L482

Error computing pedigree graph for family family

ClinicalAnalysisManagerTest.updateCustomStatusTest: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L1632

Error computing pedigree graph for family family

ClinicalAnalysisManagerTest.createInterpretationWithPanels: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L2900

Error computing pedigree graph for family family

ClinicalAnalysisManagerTest.checkFamilyMembersOrder: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L2827

Error computing pedigree graph for family family

ClinicalAnalysisManagerTest.clearPrimaryInterpretation: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L1871

Error computing pedigree graph for family family

ClinicalAnalysisManagerTest.revertInterpretationVersion: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L2109

Error computing pedigree graph for family family

ClinicalAnalysisManagerTest.updateDisorder: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L2804

Error computing pedigree graph for family family

ClinicalAnalysisManagerTest.updateInterpretationCustomStatusTest: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L1801

Error computing pedigree graph for family family

ClinicalAnalysisManagerTest.updatePanelsInClinicalAnalysis: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L2919

Error computing pedigree graph for family family

ClinicalAnalysisManagerTest.createInterpretationTest: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L1819

Error computing pedigree graph for family family

ClinicalAnalysisManagerTest.updateClinicalAnalysisRequest: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L344

Error computing pedigree graph for family family

ClinicalAnalysisManagerTest.updateCustomFlagTest: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L1677

Error computing pedigree graph for family family

ClinicalAnalysisManagerTest.deleteInterpretationTest: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L2540

Error computing pedigree graph for family family

ClinicalAnalysisManagerTest.testQueriesInFamilyCase: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L2957

Error computing pedigree graph for family family

ClinicalAnalysisManagerTest.createMultipleCasesSameFamily: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L263

Error computing pedigree graph for family family

ClinicalAnalysisManagerTest.searchClinicalAnalysisByStatus: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L2611

Error computing pedigree graph for family family

ClinicalAnalysisManagerTest.createClinicalWithMissingSamplesInFamily: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/ClinicalAnalysisManagerTest.java#L780

Error computing pedigree graph for family family

FamilyManagerTest.updateDeleteInUseInCATest: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/FamilyManagerTest.java#L1415

Error computing pedigree graph for family family1

FamilyManagerTest.updateInUseInCATest: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/FamilyManagerTest.java#L1374

Error computing pedigree graph for family family1

FamilyManagerTest.recalculateRoles: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/FamilyManagerTest.java#L1241

Error computing pedigree graph for family Martinez-Martinez

FamilyManagerTest.createFamilyMissingMember: opencga-catalog/src/test/java/org/opencb/opencga/catalog/managers/FamilyManagerTest.java#L1088

Error computing pedigree graph for family Martinez-Martinez

test / Execute JUnit and Jacoco tests

There were 80 failed tests

test / Execute Sonar Analysis

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/setup-java@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

test / Execute JUnit and Jacoco tests

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/setup-java@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

Artifacts

Produced during runtime

Name	Size
build-folder Expired	761 MB