Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

new container in merge_reports #135

Merged
merged 2 commits into from
Jan 24, 2025
Merged

new container in merge_reports #135

merged 2 commits into from
Jan 24, 2025

Conversation

kubranarci
Copy link
Contributor

PR checklist

  • This comment contains a description of changes (with reason).
  • If you've fixed a bug or added code that should be tested, add tests!
  • If you've added a new tool - have you followed the pipeline conventions in the contribution docs
  • If necessary, also make a PR on the nf-core/variantbenchmarking branch on the nf-core/test-datasets repository.
  • Make sure your code lints (nf-core pipelines lint).
  • Ensure the test suite passes (nextflow run . -profile test,docker --outdir <OUTDIR>).
  • Check for unexpected warnings in debug mode (nextflow run . -profile debug,test,docker --outdir <OUTDIR>).
  • Usage Documentation in docs/usage.md is updated.
  • Output Documentation in docs/output.md is updated.
  • CHANGELOG.md is updated.
  • README.md is updated (including new tool citations and authors/contributors).

@kubranarci kubranarci linked an issue Jan 22, 2025 that may be closed by this pull request
MERGE_REPORTS container has high vulneribilities #134
Closed
@nf-core-bot
Copy link
Member

⚠️ Newer version of the nf-core template is available.

Your pipeline is using an old version of the nf-core template: 3.0.1.
Please update your pipeline to the latest version.

For more documentation on how to update your pipeline, please see the nf-core documentation and Synchronisation documentation.

nvnieuwk
nvnieuwk approved these changes Jan 24, 2025
View reviewed changes
Copy link
Contributor

@nvnieuwk nvnieuwk left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

LGTM

@kubranarci kubranarci merged commit c887d26 into dev Jan 24, 2025
16 checks passed
@kubranarci kubranarci deleted the 134-merge_reports-container-has-high-vulneribilities branch January 24, 2025 09:57
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Reviewers

@nvnieuwk nvnieuwk nvnieuwk approved these changes

Assignees
No one assigned
Labels
None yet
Projects
None yet
Milestone
No milestone
Development

Successfully merging this pull request may close these issues.

MERGE_REPORTS container has high vulneribilities
3 participants
@kubranarci @nf-core-bot @nvnieuwk