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adding plots to multiqc #108

Merged
merged 6 commits into from
Nov 28, 2024
Merged

adding plots to multiqc #108

merged 6 commits into from
Nov 28, 2024

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kubranarci
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PR checklist

  • This comment contains a description of changes (with reason).
  • If you've fixed a bug or added code that should be tested, add tests!
  • If you've added a new tool - have you followed the pipeline conventions in the contribution docs
  • If necessary, also make a PR on the nf-core/variantbenchmarking branch on the nf-core/test-datasets repository.
  • Make sure your code lints (nf-core pipelines lint).
  • Ensure the test suite passes (nextflow run . -profile test,docker --outdir <OUTDIR>).
  • Check for unexpected warnings in debug mode (nextflow run . -profile debug,test,docker --outdir <OUTDIR>).
  • Usage Documentation in docs/usage.md is updated.
  • Output Documentation in docs/output.md is updated.
  • CHANGELOG.md is updated.
  • README.md is updated (including new tool citations and authors/contributors).

@kubranarci kubranarci linked an issue Nov 21, 2024 that may be closed by this pull request
add plots and reports to MULTIQC #88
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@nf-core-bot
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⚠️ Newer version of the nf-core template is available.

Your pipeline is using an old version of the nf-core template: 3.0.1.
Please update your pipeline to the latest version.

For more documentation on how to update your pipeline, please see the nf-core documentation and Synchronisation documentation.

@kubranarci kubranarci requested a review from nvnieuwk November 27, 2024 07:04
nvnieuwk
nvnieuwk approved these changes Nov 28, 2024
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@nvnieuwk nvnieuwk left a comment

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LGTM

@kubranarci kubranarci merged commit 66e75a6 into dev Nov 28, 2024
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@kubranarci kubranarci deleted the add-multiqc-support branch November 28, 2024 07:57
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@nvnieuwk nvnieuwk nvnieuwk approved these changes

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add plots and reports to MULTIQC
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@kubranarci @nf-core-bot @nvnieuwk