Migrate pipeline pytest alignment and annotation tests to nf-test #6472

Job	Run time
Test workflow \| docker \| 24.04.2 \| 1/5	3m 0s
Test workflow \| docker \| 24.04.2 \| 2/5	2m 53s
Test workflow \| docker \| 24.04.2 \| 3/5	5m 2s
Test workflow \| docker \| 24.04.2 \| 4/5	3m 1s
Test workflow \| docker \| 24.04.2 \| 5/5	3m 57s
Test function \| docker \| 24.04.2 \| 1/5	2m 53s
Test function \| docker \| 24.04.2 \| 2/5	2m 47s
Test function \| docker \| 24.04.2 \| 3/5	4m 34s
Test function \| docker \| 24.04.2 \| 4/5	2m 46s
Test function \| docker \| 24.04.2 \| 5/5	2m 56s
Test pipeline \| docker \| 24.04.2 \| 1/5	11m 32s
Test pipeline \| docker \| 24.04.2 \| 2/5	8m 48s
Test pipeline \| docker \| 24.04.2 \| 3/5	11m 7s
Test pipeline \| docker \| 24.04.2 \| 4/5	8m 21s
Test pipeline \| docker \| 24.04.2 \| 5/5	12m 33s
Test workflow \| docker \| latest-everything \| 1/5	4m 51s
Test workflow \| docker \| latest-everything \| 2/5	2m 59s
Test workflow \| docker \| latest-everything \| 3/5	3m 4s
Test workflow \| docker \| latest-everything \| 4/5	4m 38s
Test workflow \| docker \| latest-everything \| 5/5	5m 0s
Test function \| docker \| latest-everything \| 1/5	2m 46s
Test function \| docker \| latest-everything \| 2/5	4m 13s
Test function \| docker \| latest-everything \| 3/5	4m 2s
Test function \| docker \| latest-everything \| 4/5	2m 50s
Test function \| docker \| latest-everything \| 5/5	3m 1s
Test pipeline \| docker \| latest-everything \| 1/5	11m 6s
Test pipeline \| docker \| latest-everything \| 2/5	10m 27s
Test pipeline \| docker \| latest-everything \| 3/5	9m 38s
Test pipeline \| docker \| latest-everything \| 4/5	7m 42s
Test pipeline \| docker \| latest-everything \| 5/5	10m 10s
	2h 52m 37s

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