Merge branch 'dev' into fix_prepro_arg

nf-core · Dec 18, 2024 · 11b8670 · 11b8670
2 parents 81f2824 + 1e383e2
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diff --git a/CHANGELOG.md b/CHANGELOG.md
@@ -20,6 +20,7 @@ Special thanks to the following for their contributions to the release:
 - [PR #1467](https://github.com/nf-core/rnaseq/pull/1467) - Add test suite for UMI handling functionality
 - [PR #1466](https://github.com/nf-core/rnaseq/pull/1466) - Factor out UMI handling
 - [PR #1470](https://github.com/nf-core/rnaseq/pull/1470) - Update subworkflow to account for fix to bad argument handling
+- [PR #1469](https://github.com/nf-core/rnaseq/pull/1469) - Minor docs fix
 - [PR #1459](https://github.com/nf-core/rnaseq/pull/1466) - Remove reference to unused "skip_sample_count" value in email templates
 
 ### Software dependencies

diff --git a/docs/images/mqc_fastqc_adapter.png b/docs/images/mqc_fastqc_adapter.png
diff --git a/docs/images/mqc_fastqc_counts.png b/docs/images/mqc_fastqc_counts.png
diff --git a/docs/images/mqc_fastqc_quality.png b/docs/images/mqc_fastqc_quality.png
diff --git a/docs/output.md b/docs/output.md
@@ -74,7 +74,7 @@ The pipeline is built using [Nextflow](https://www.nextflow.io/) and processes d
 
 If multiple libraries/runs have been provided for the same sample in the input samplesheet (e.g. to increase sequencing depth) then these will be merged at the very beginning of the pipeline in order to have consistent sample naming throughout the pipeline. Please refer to the [usage documentation](https://nf-co.re/rnaseq/usage#samplesheet-input) to see how to specify these samples in the input samplesheet.
 
-# fq lint
+### fq lint
 
 <details markdown="1">
 <summary>Output files</summary>