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Factor out umi handling #165

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Factor out umi handling

Factor out umi handling #165

Triggered via pull request December 12, 2024 09:51
@pinin4fjordspinin4fjords
synchronize #1466
Status Success
Total duration 38s
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template_version_comment.yml

on: pull_request_target
template_version
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6 errors and 1 warning
Test pipeline with dummy UMI settings.Params: --aligner hisat2 --umi_dedup_tool 'umicollapse': Test pipeline with dummy UMI settings#L1
Assertion failed: 2 of 2 assertions failed
Test pipeline with dummy UMI settings.--umi_dedup_tool 'umitools': Test pipeline with dummy UMI settings#L1
Assertion failed: 1 of 2 assertions failed
Test pipeline with dummy UMI settings.--umi_dedup_tool 'umitools - stub: Test pipeline with dummy UMI settings#L1
Assertion failed: 1 of 2 assertions failed
Test pipeline with dummy UMI settings.Params: --aligner hisat2 --umi_dedup_tool 'umicollapse': Test pipeline with dummy UMI settings#L1
Assertion failed: 2 of 2 assertions failed
Test pipeline with dummy UMI settings.--umi_dedup_tool 'umitools': Test pipeline with dummy UMI settings#L1
Assertion failed: 1 of 2 assertions failed
Test pipeline with dummy UMI settings.--umi_dedup_tool 'umitools - stub: Test pipeline with dummy UMI settings#L1
Assertion failed: 1 of 2 assertions failed
template_version
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636