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patch sortmerna to 4.3.7 for ARM compatibility #3093

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patch sortmerna to 4.3.7 for ARM compatibility

patch sortmerna to 4.3.7 for ARM compatibility #3093

Run time

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Job Run time
Check for changes
19s
Run tests (tests/skip_qc.nf.test docker NF-24.04.2)
12m 50s
Run tests (tests/remove_ribo_rna.nf.test docker NF-24.04.2)
20m 37s
Run tests (tests/hisat2.nf.test docker NF-24.04.2)
14m 22s
Run tests (subworkflows/nf-core/fastq_qc_trim_filter_setstrandedness/tests/main.function.nf.test docker NF-24.04.2)
5m 31s
Run tests (tests/min_mapped_reads.nf.test docker NF-24.04.2)
13m 21s
Run tests (tests/default.nf.test docker NF-24.04.2)
13m 55s
Run tests (subworkflows/local/prepare_genome/tests/main.nf.test docker NF-24.04.2)
17m 43s
Run tests (tests/salmon.nf.test docker NF-24.04.2)
8m 20s
Run tests (tests/featurecounts_group_type.nf.test docker NF-24.04.2)
19m 20s
Run tests (tests/star_rsem.nf.test docker NF-24.04.2)
16m 38s
Run tests (subworkflows/nf-core/fastq_qc_trim_filter_setstrandedness/tests/main.nf.test docker NF-24.04.2)
5m 17s
Run tests (modules/nf-core/sortmerna/tests/main.nf.test docker NF-24.04.2)
5m 47s
Run tests (tests/skip_trimming.nf.test docker NF-24.04.2)
13m 36s
Run tests (tests/kallisto.nf.test docker NF-24.04.2)
8m 26s
Run tests (tests/skip_qc.nf.test docker NF-latest-everything)
11m 23s
Run tests (tests/remove_ribo_rna.nf.test docker NF-latest-everything)
20m 16s
Run tests (tests/hisat2.nf.test docker NF-latest-everything)
17m 24s
Run tests (subworkflows/nf-core/fastq_qc_trim_filter_setstrandedness/tests/main.function.nf.test docker NF-latest-everything)
2m 50s
Run tests (tests/min_mapped_reads.nf.test docker NF-latest-everything)
13m 47s
Run tests (tests/default.nf.test docker NF-latest-everything)
14m 1s
Run tests (subworkflows/local/prepare_genome/tests/main.nf.test docker NF-latest-everything)
23m 8s
Run tests (tests/salmon.nf.test docker NF-latest-everything)
8m 2s
Run tests (tests/featurecounts_group_type.nf.test docker NF-latest-everything)
13m 44s
Run tests (tests/star_rsem.nf.test docker NF-latest-everything)
14m 10s
Run tests (subworkflows/nf-core/fastq_qc_trim_filter_setstrandedness/tests/main.nf.test docker NF-latest-everything)
5m 46s
Run tests (modules/nf-core/sortmerna/tests/main.nf.test docker NF-latest-everything)
4m 11s
Run tests (tests/skip_trimming.nf.test docker NF-latest-everything)
13m 7s
Run tests (tests/kallisto.nf.test docker NF-latest-everything)
15m 32s
confirm-pass
1s
5h 53m 24s