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New module: Kraken2/Bracken on Unaligned Sequences for Contamination Detection #2973

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New module: Kraken2/Bracken on Unaligned Sequences for Contamination Detection

New module: Kraken2/Bracken on Unaligned Sequences for Contamination Detection #2973

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Job Run time
Check for changes
22s
tests/default.nf.test docker NF-latest-everything
16m 35s
modules/nf-core/hisat2/align/tests/main.nf.test docker NF-latest-everything
2m 35s
subworkflows/local/utils_nfcore_rnaseq_pipeline/tests/main.pipeline_initialistion.workflow.nf.test docker NF-latest-everything
27s
subworkflows/local/utils_nfcore_rnaseq_pipeline/tests/main.pipeline_completion.workflow.nf.test docker NF-latest-everything
25s
tests/skip_qc.nf.test docker NF-latest-everything
8m 54s
modules/nf-core/bracken/bracken/tests/main.nf.test docker NF-latest-everything
1m 42s
tests/star_rsem.nf.test docker NF-latest-everything
11m 32s
modules/nf-core/kraken2/kraken2/tests/main.nf.test docker NF-latest-everything
1m 1s
tests/remove_ribo_rna.nf.test docker NF-latest-everything
16m 14s
subworkflows/nf-core/fastq_align_hisat2/tests/main.nf.test docker NF-latest-everything
1m 59s
tests/salmon.nf.test docker NF-latest-everything
5m 32s
tests/kallisto.nf.test docker NF-latest-everything
5m 34s
tests/skip_trimming.nf.test docker NF-latest-everything
10m 31s
tests/min_mapped_reads.nf.test docker NF-latest-everything
10m 53s
subworkflows/local/utils_nfcore_rnaseq_pipeline/tests/main.function.nf.test docker NF-latest-everything
3m 49s
tests/featurecounts_group_type.nf.test docker NF-latest-everything
11m 33s
tests/hisat2.nf.test docker NF-latest-everything
9m 21s
subworkflows/local/align_star/tests/main.nf.test docker NF-latest-everything
2m 35s
tests/default.nf.test docker NF-23.04
11m 59s
modules/nf-core/hisat2/align/tests/main.nf.test docker NF-23.04
2m 40s
subworkflows/local/utils_nfcore_rnaseq_pipeline/tests/main.pipeline_initialistion.workflow.nf.test docker NF-23.04
31s
subworkflows/local/utils_nfcore_rnaseq_pipeline/tests/main.pipeline_completion.workflow.nf.test docker NF-23.04
30s
tests/skip_qc.nf.test docker NF-23.04
9m 7s
modules/nf-core/bracken/bracken/tests/main.nf.test docker NF-23.04
1m 39s
tests/star_rsem.nf.test docker NF-23.04
11m 16s
modules/nf-core/kraken2/kraken2/tests/main.nf.test docker NF-23.04
1m 15s
tests/remove_ribo_rna.nf.test docker NF-23.04
15m 44s
subworkflows/nf-core/fastq_align_hisat2/tests/main.nf.test docker NF-23.04
2m 0s
tests/salmon.nf.test docker NF-23.04
5m 35s
tests/kallisto.nf.test docker NF-23.04
5m 39s
tests/skip_trimming.nf.test docker NF-23.04
10m 30s
tests/min_mapped_reads.nf.test docker NF-23.04
10m 34s
subworkflows/local/utils_nfcore_rnaseq_pipeline/tests/main.function.nf.test docker NF-23.04
3m 53s
tests/featurecounts_group_type.nf.test docker NF-23.04
11m 22s
tests/hisat2.nf.test docker NF-23.04
9m 21s
subworkflows/local/align_star/tests/main.nf.test docker NF-23.04
2m 33s
confirm-pass
1s
3h 57m 43s